Detail information of GWHGAAZE014555


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGX93050.10geraniol 10-hydroxylase-like protein [Lonicera japonica]
Swissprottr|Q8VWZ7|C76B6_CATRO1E-168Geraniol 8-hydroxylase
trEMBLtr|U5NH25|U5NH25_LONJA0Geraniol 10-hydroxylase-like protein {ECO:0000313|EMBL:AGX93050.1}
TAIR10AT2G45580.15E-48cytochrome P450, family 76, subfamily C, polypeptide 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1380735413808286+
GWHAAZE00000004mRNA1380735413808286+
GWHAAZE00000004exon1380735413808286+
GWHAAZE00000004CDS1380735413808286+
Transcript Sequence

Network for GWHGAAZE014555

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0264map00626 Naphthalene degradation
map00830 Retinol metabolism
map00625 Chloroalkane and chloroalkene degradation
map01220 Degradation of aromatic compounds
GO:0055114 oxidation-reduction process GOslim:biological_process
map00071 Fatty acid degradation
map00680 Methane metabolism
map00350 Tyrosine metabolism
map00982 Drug metabolism - cytochrome P450
map00980 Metabolism of xenobiotics by cytochrome P450
map00010 Glycolysis / Gluconeogenesis
CYTOCHROME_P536_Family CYTOCHROME_P536_Family
CYTOCHROME_P525_Family CYTOCHROME_P525_Family
map01110 Biosynthesis of secondary metabolites
map01200 Carbon metabolism
map00900 Terpenoid backbone biosynthesis
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function
GO:0005506 iron ion binding GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
map01120 Microbial metabolism in diverse environments
GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity GOslim:molecular_function
GO:0070402 NADPH binding GOslim:molecular_function
GO:0016114 terpenoid biosynthetic process GOslim:biological_process
map01100 Metabolic pathways
map00902 Monoterpenoid biosynthesis


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p450332951.00E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf53.638
SRR3591706second leaf336.885
SRR3591707mature leaf49.994
SRR3591708Shoot apex176.812
SRR3591709Stem0.676
SRR3591710White floral bud1.838
SRR3591711White flower0.344
SRR3591712Green floral bud43.313
SRR3591713Yellow flower0.245
SRP173429 SRR8316895Juvenile bud stage 148.405
SRR8316896Juvenile bud stage 103.051
SRR8316897Juvenile bud stage 42.658
SRR8316894Third green stage 15.442
SRR8316900Third green stage 7.001
SRR8316901Third green stage 12.300
SRR8316898Complete white stage 0.998
SRR8316899Complete white stage 18.034
SRR8316903Complete white stage 1.925
SRR8316902Silver flowering stage0.039
SRR8316904Silver flowering stage0.099
SRR8316905Silver flowering stage0.147
SRR8316906Gold flowering stage 0.674
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.452
SRP132670SRR6706286Control29.935
SRR6706287Light intensity 50%18.326
SRR6706288Light intensity 20%19.202
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1117.863
CNS0095593Slightly white alabastrum(diploid) 2122.466
CNS0095594Slightly white alabastrum(diploid) 3155.081
CNS0095595Whole white alabastrum(diploid) 2266.407
CNS0095596Whole white alabastrum(diploid) 38.474
CNS0095597Whole white alabastrum(diploid) 4139.530
CNS0095598Silvery flower (diploied) 119.453
CNS0095599Silvery flower (diploied) 231.069
CNS0095600Silvery flower (diploied) 32.732
CNS0095601Golden flower (diploid) 10.525
CNS0095602Golden flower (diploid) 20.507
CNS0095603Golden flower (diploid) 30.630
CNS0095604Slightly white alabastrum(tetraploid) 177.005
CNS0095605Slightly white alabastrum(tetraploid) 2119.714
CNS0095606Slightly white alabastrum(tetraploid) 3477.630
CNS0095607Whole white alabastrum(tetraploid) 152.864
CNS0095608Whole white alabastrum(tetraploid) 28.615
CNS0095609Whole white alabastrum(tetraploid) 332.661
CNS0095610Silvery flower (tetraploid) 10.589
CNS0095611Silvery flower (tetraploid) 20.776
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.120
CNS0095614Golden flower (tetraploid) 20.176
CNS0095615Golden flower (tetraploid) 30.070
CRA001975CRR073297Stem 195.086
CRR073298Stem 2130.080
CRR073299Stem 3177.406
CRR073300Leaf 110.057
CRR073301Leaf 28.598
CRR073302Leaf 310.568
CRR073303Juvenile bud 126.422
CRR073304Juvenile bud 219.204
CRR073305Juvenile bud 323.900
CRR073306Third green 10.213
CRR073307Third green 21.919
CRR073308Third green 30.084
CRR073309Second white 10.103
CRR073310Second white 20.129
CRR073311Second white 30.183
CRR073312Silver flowering 10.196
CRR073313Silver flowering 20.262
CRR073314Silver flowering 30.035
CRR073315Gold flowering 146.202
CRR073316Gold flowering 255.323
CRR073317Gold flowering 3155.791
CRR073318Tawny withering 1303.915
CRR073319Tawny withering 288.691
CRR073320Tawny withering 3535.125