Gene detail

Detail information of GWHGAAZE014528

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007047070.1	0	BEL1-like homeodomain protein 2 isoform 1 [Theobroma cacao]
Swissprot	tr\|Q9SW80\|BLH2_ARATH	2E-168	BEL1-like homeodomain protein 2
trEMBL	tr\|A0A061DGL1\|A0A061DGL1_THECC	0	BEL1-like homeodomain protein 2 isoform 1 {ECO:0000313\|EMBL:EOX91227.1}
TAIR10	AT4G36870.2	5E-116	BEL1-like homeodomain 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	13433570	13439493	+
GWHAAZE00000004	mRNA	13433570	13439493	+
GWHAAZE00000004	exon	13433570	13433843	+
GWHAAZE00000004	exon	13433928	13434607	+
GWHAAZE00000004	exon	13435322	13435704	+
GWHAAZE00000004	exon	13436793	13436853	+
GWHAAZE00000004	exon	13438888	13439493	+
GWHAAZE00000004	CDS	13433570	13433843	+
GWHAAZE00000004	CDS	13433928	13434607	+
GWHAAZE00000004	CDS	13435322	13435704	+
GWHAAZE00000004	CDS	13436793	13436853	+
GWHAAZE00000004	CDS	13438888	13439493	+

Transcript Sequence
>GWHTAAZE014542 TCACCCCAACAACAACACCACATAGCACAACAGATCCGGAGAGACAAACTCAGAGTCCAAGGATTCGACCCCCCGCCCCCACTAGACCCATTAGATCATGAACCGGACTCCAGTACCCTCCAGCCCTACGAAACCGCCGGGATGTTATCAGAAATGTTCAATTTCCCTTCAGGAGTCAACAGCGCCACTGAATTGTTGGATAACCACCTACCACCGCCTTACCGAAGTCCCAGGCCGACTACCACCGGCCCTGATTGGTACGGAAACCGAGAAGGGATTAATGCGGACTCAGCTGCAGCCATGCAGCTTTTCTTGATGAACCCACAACCGAGGTCGCCTTCTCCCTCTTCATCTTCTCATCATCATCCTCCTTCCACACTTCACATGTTACTTCCAACCCCGCCAAGTAGTACCACTCTACAAGGAGGGGCTTTTGGTCAATTCACATGGGGTCCTAGTACCGAGATCGGAGGGGTTGTTGAAGGGCAAGGTCTATCTCTTTCATTGTCGTCCTCTTTACAACACTTGGAGGTGGCGAAGGCCGAAGAATTGAGGATGGGAGATGGTGGGATGATGTTTTATAACCAAGGAGGAGGGGTTAATACGACGGCATATAATCAATATAAGAATTATGGGGGAGTTGTGGGTCAAAGTCAACAACAGGTTCATCATGTTGGGTATGGTGGTGCTAATTCAATGGGGGTGGTGAATGTTTTGAGGAATTCAAAGTATGTGAAGGCTGCTCAGGAATTGCTCGAGGAGTTTTGTAGTGTTGGGAGGGGTCAGTTCAAGAAGAATAAGTTTGGAAGGGTTAGTAGTACGAACCCTAATACTACTGGTCAAACTTCTAGTGGTGGTGGTGGAGGAGGAGGCGGTGGTGGTTCATCATCATCATCGAAGGATCTGCCACCCCCTTTATCTGCTGCTGATAGGATTGAGCACCAAAGGAGAAAGGTGGATCGAAGATACAACCACTACTGCGAACAGATGCAAATGGTAGTGAACTCATTTGATTTAGTGATGGGATTTGGAGCGGCTGTCCCATACACAGCACTTGCACAAAAGGCCATGTCCAGGCATTTCCGTTGCCTAAAGGATGCAATATCCGCACAATTGAAGCACAGTTGCGAGCTCTTGGGTGAAAAAGACGCGGGCACATCAGGAGTGACCAAAGGGGAGACTCCAAGACTGAAGCTACTCGAGCAAAGCCTAAGACAACAAAGAGCGTTCCACCAAATGGGGATGATGGAACAAGAAGCTTGGCGACCACAAAGAGGCTTGCCTGAACGCTCCGTTAATATTTTGAGAGCGTGGCTTTTCGAGCATTTCCTACACCCGTACCCGAGTGATGCTGATAAACACCTGTTAGCAAGACAGACTGGTCTCTCTAGAAACCAGGTATCAAACTGGTTCATTAATGCGAGAGTCCGGTTGTGGAAACCCATGGTGGAAGAAATGTACCAAAAGGAGAGCAAAGAAGACACCACCACAGAAGAAGATCAAGAAAAAGAAGAAAGAGAAAACAACAACAGTGACCCGGCCCCCTCTACTGCTACTGCACAAACACCAAAACCTCCACCAGTATCTACTGCTTCTACTTCCACGACTTCAACACCAACAGCAACAACAACTACCATTAGATCCCATATTAATTATCCCGAAAACGACCCTTCACTACTCGCCATCAATACTCAATGCTTCTCCGAAAACCAAGCCAAACACGGGTCCCACTCACTTCCCCATACCTATACTGCCGTCTCACCAGCTATGCCGCCGGTATCCCAGCCCTTCCCTACGGCTTACGAGGCCAACATGTGTCACCGCGGCGGTTTTGTGGGCAATGATTACGGGACCACCCACCCCATGAATAACGCTGACGTGGGGTCGACGTTTATAAGGTTCGGGACCACTGCCGGTGATGTGTCGCTTACTCTAGGGTTACGCCATGCCGGTAACCCACCGGATAAGGGTAATTTTTCGGTAAGAGACTTTGGGGGATGTTAA

Network for GWHGAAZE014528

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07526.12	POX	238	369	8.60E-41
PF05920.12	Homeobox_KN	438	477	1.20E-17

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-BELL

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.689
	SRR3591706	second leaf	50.613
	SRR3591707	mature leaf	78.344
	SRR3591708	Shoot apex	29.031
	SRR3591709	Stem	15.012
	SRR3591710	White floral bud	3.675
	SRR3591711	White flower	7.244
	SRR3591712	Green floral bud	10.731
	SRR3591713	Yellow flower	3.805
SRP173429	SRR8316895	Juvenile bud stage	8.417
	SRR8316896	Juvenile bud stage	10.568
	SRR8316897	Juvenile bud stage	4.543
	SRR8316894	Third green stage	3.010
	SRR8316900	Third green stage	5.934
	SRR8316901	Third green stage	5.561
	SRR8316898	Complete white stage	0.232
	SRR8316899	Complete white stage	1.453
	SRR8316903	Complete white stage	0.204
	SRR8316902	Silver flowering stage	0.450
	SRR8316904	Silver flowering stage	0.471
	SRR8316905	Silver flowering stage	0.132
	SRR8316906	Gold flowering stage	0.821
	SRR8316907	Gold flowering stage	0.889
	SRR8316908	Gold flowering stage	1.787
SRP132670	SRR6706286	Control	9.777
	SRR6706287	Light intensity 50%	9.561
	SRR6706288	Light intensity 20%	9.541
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.807
	CNS0095593	Slightly white alabastrum(diploid) 2	1.571
	CNS0095594	Slightly white alabastrum(diploid) 3	7.723
	CNS0095595	Whole white alabastrum(diploid) 2	1.011
	CNS0095596	Whole white alabastrum(diploid) 3	1.806
	CNS0095597	Whole white alabastrum(diploid) 4	1.393
	CNS0095598	Silvery flower (diploied) 1	1.161
	CNS0095599	Silvery flower (diploied) 2	0.651
	CNS0095600	Silvery flower (diploied) 3	0.510
	CNS0095601	Golden flower (diploid) 1	0.885
	CNS0095602	Golden flower (diploid) 2	1.078
	CNS0095603	Golden flower (diploid) 3	0.698
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.573
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.342
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.901
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.786
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.596
	CNS0095609	Whole white alabastrum(tetraploid) 3	8.093
	CNS0095610	Silvery flower (tetraploid) 1	0.973
	CNS0095611	Silvery flower (tetraploid) 2	1.075
	CNS0095612	Silvery flower (tetraploid) 3	1.531
	CNS0095613	Golden flower (tetraploid) 1	0.703
	CNS0095614	Golden flower (tetraploid) 2	1.052
	CNS0095615	Golden flower (tetraploid) 3	0.273
CRA001975	CRR073297	Stem 1	21.944
	CRR073298	Stem 2	17.219
	CRR073299	Stem 3	14.275
	CRR073300	Leaf 1	5.987
	CRR073301	Leaf 2	6.815
	CRR073302	Leaf 3	5.115
	CRR073303	Juvenile bud 1	2.005
	CRR073304	Juvenile bud 2	1.446
	CRR073305	Juvenile bud 3	2.301
	CRR073306	Third green 1	6.228
	CRR073307	Third green 2	1.029
	CRR073308	Third green 3	4.334
	CRR073309	Second white 1	2.964
	CRR073310	Second white 2	4.875
	CRR073311	Second white 3	5.628
	CRR073312	Silver flowering 1	3.016
	CRR073313	Silver flowering 2	3.325
	CRR073314	Silver flowering 3	1.694
	CRR073315	Gold flowering 1	30.314
	CRR073316	Gold flowering 2	40.718
	CRR073317	Gold flowering 3	24.537
	CRR073318	Tawny withering 1	8.661
	CRR073319	Tawny withering 2	5.128
	CRR073320	Tawny withering 3	7.876