Detail information of GWHGAAZE014516


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009618117.11.0456E-138PREDICTED: uncharacterized protein LOC104110354 [Nicotiana tomentosiformis]
Swissprottr|Q1PE15|MCU1_ARATH6E-118Calcium uniporter protein 1, mitochondrial (Precursor)
trEMBLtr|D7SPJ7|D7SPJ7_VITVI2E-135Putative uncharacterized protein {ECO:0000313|EMBL:CBI17576.3}
TAIR10AT4G36820.14E-96Protein of unknown function (DUF607)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1321358913215793+
GWHAAZE00000004mRNA1321358913215793+
GWHAAZE00000004exon1321358913214143+
GWHAAZE00000004exon1321534413215793+
GWHAAZE00000004CDS1321358913214143+
GWHAAZE00000004CDS1321534413215793+
Transcript Sequence

Network for GWHGAAZE014516

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04678.14MCU1573153.10E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20858MCU Calcium signaling pathway map04020
Cellular senescencemap04218
NOD-like receptor signaling pathwaymap04621

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.215
SRR3591706second leaf1.412
SRR3591707mature leaf8.548
SRR3591708Shoot apex6.189
SRR3591709Stem25.194
SRR3591710White floral bud3.839
SRR3591711White flower7.229
SRR3591712Green floral bud7.211
SRR3591713Yellow flower31.561
SRP173429 SRR8316895Juvenile bud stage 19.771
SRR8316896Juvenile bud stage 8.863
SRR8316897Juvenile bud stage 11.235
SRR8316894Third green stage 3.856
SRR8316900Third green stage 14.359
SRR8316901Third green stage 16.821
SRR8316898Complete white stage 0.145
SRR8316899Complete white stage 0.738
SRR8316903Complete white stage 0.937
SRR8316902Silver flowering stage6.281
SRR8316904Silver flowering stage3.723
SRR8316905Silver flowering stage2.233
SRR8316906Gold flowering stage 12.571
SRR8316907Gold flowering stage 7.368
SRR8316908Gold flowering stage 4.955
SRP132670SRR6706286Control6.984
SRR6706287Light intensity 50%6.337
SRR6706288Light intensity 20%5.216
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.563
CNS0095593Slightly white alabastrum(diploid) 210.439
CNS0095594Slightly white alabastrum(diploid) 313.829
CNS0095595Whole white alabastrum(diploid) 217.366
CNS0095596Whole white alabastrum(diploid) 319.835
CNS0095597Whole white alabastrum(diploid) 417.331
CNS0095598Silvery flower (diploied) 12.970
CNS0095599Silvery flower (diploied) 24.308
CNS0095600Silvery flower (diploied) 32.730
CNS0095601Golden flower (diploid) 112.026
CNS0095602Golden flower (diploid) 215.986
CNS0095603Golden flower (diploid) 313.838
CNS0095604Slightly white alabastrum(tetraploid) 16.241
CNS0095605Slightly white alabastrum(tetraploid) 27.176
CNS0095606Slightly white alabastrum(tetraploid) 31.095
CNS0095607Whole white alabastrum(tetraploid) 112.503
CNS0095608Whole white alabastrum(tetraploid) 211.851
CNS0095609Whole white alabastrum(tetraploid) 36.283
CNS0095610Silvery flower (tetraploid) 11.489
CNS0095611Silvery flower (tetraploid) 20.676
CNS0095612Silvery flower (tetraploid) 31.162
CNS0095613Golden flower (tetraploid) 155.727
CNS0095614Golden flower (tetraploid) 25.109
CNS0095615Golden flower (tetraploid) 374.231
CRA001975CRR073297Stem 14.937
CRR073298Stem 24.803
CRR073299Stem 32.339
CRR073300Leaf 19.922
CRR073301Leaf 212.087
CRR073302Leaf 35.964
CRR073303Juvenile bud 15.614
CRR073304Juvenile bud 23.305
CRR073305Juvenile bud 30.797
CRR073306Third green 12.906
CRR073307Third green 22.029
CRR073308Third green 32.866
CRR073309Second white 10.585
CRR073310Second white 21.452
CRR073311Second white 31.396
CRR073312Silver flowering 16.354
CRR073313Silver flowering 25.153
CRR073314Silver flowering 33.747
CRR073315Gold flowering 17.674
CRR073316Gold flowering 210.827
CRR073317Gold flowering 36.984
CRR073318Tawny withering 12.805
CRR073319Tawny withering 23.371
CRR073320Tawny withering 32.407