Gene detail

Detail information of GWHGAAZE014450

Functional Annotation

Database	Orthologs	Annotation
Nr	CBI16941.3	unnamed protein product [Vitis vinifera]
Swissprot	tr\|Q43147\|C85A1_SOLLC	Cytochrome P450 85A1
trEMBL	tr\|D7SMP3\|D7SMP3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI16941.3}
TAIR10	AT3G30180.1	brassinosteroid-6-oxidase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	12210456	12213572	+
GWHAAZE00000004	mRNA	12210456	12213572	+
GWHAAZE00000004	exon	12210456	12210646	+
GWHAAZE00000004	exon	12211072	12211393	+
GWHAAZE00000004	exon	12211484	12211633	+
GWHAAZE00000004	exon	12211710	12211955	+
GWHAAZE00000004	exon	12212039	12212125	+
GWHAAZE00000004	exon	12212215	12212293	+
GWHAAZE00000004	exon	12213004	12213110	+
GWHAAZE00000004	exon	12213236	12213360	+
GWHAAZE00000004	exon	12213467	12213572	+
GWHAAZE00000004	CDS	12210456	12210646	+
GWHAAZE00000004	CDS	12211072	12211393	+
GWHAAZE00000004	CDS	12211484	12211633	+
GWHAAZE00000004	CDS	12211710	12211955	+
GWHAAZE00000004	CDS	12212039	12212125	+
GWHAAZE00000004	CDS	12212215	12212293	+
GWHAAZE00000004	CDS	12213004	12213110	+
GWHAAZE00000004	CDS	12213236	12213360	+
GWHAAZE00000004	CDS	12213467	12213572	+

Transcript Sequence
>GWHTAAZE014464 ATGGCTGTCTTCATAGTGGTTATTGGGGTGATCTTGGGGTTCTGTCTCTTCAGTACAGCTCTGTTGAGATGGAATGAAGTAAGGTACAGGAAAAAAGGTCTGCCTCCAGGTACTATGGGTTGGCCAGTTTTTGGTGAAACTACGGAGTTTCTAAAACAAGGTCCAAGTTTCATGAAAAACCAGAGAGCAAGGTATGGAAGTGTTTTTAAATCCCACATATTGGGGTGTCCTACAATTGTTTCCATGGATCCAGAGCTCAACAGATACATACTAATGAATGAAGGAAAAGGTCTTGTACCTGGTTATCCACAGTCCATGCTAGACATTTTGGGGAAATGCAATATTGCAGCTGTCCATGGTTCCACCCACAAACACATGAGAGGAGCATTGCTTTCTCTCGTAAGCCCTGCCATCATCAGAGAACAACTTTTGCCTAAAATCGACCACTTCATGAGATTCCACCTGACCAATTGGGATAGCAAAGTCATTGACATTCAAGAAAAAACTAAAGAGATGGCACTTCTATCATCGCTTAAGCAAATTGCGGGAATCGAATCTGGTCCCATGTCTCAAGAATTCATGCCTGAATTTTTTAAGTTAGTACTGGGAACCCTTTCGTTGCCTATCAACCTTCCCAGCACAAATTATCATCGTGGTTTTCAGGCAAGGAAGAATATTACCAGCATGCTTAGACAACTTATAGCAGAAAGAAGAGCTTCACAAGAAACCCAACAAGACATGCTTGGTTTCCTAATGAATGGTGAAGAAAGTAGATATAAATTAAGTGACGAGGAGATAATTGATCAAATTATCACTATTCTGTACTCCGGGTACGAAACTGTTTCAACTACTTCGATGATGGCTGTCAAGTATCTGCATGATCATCCAAGCGTCCTTGAAGAACTCAGAAAAGAACATATGGCAATTAGGAGAACGAAGAAACCAGAAGATCCAATCAACTGGAATGACTATAAGGCAATGCGCTTCACTCGTGCTGTGATATTTGAGACCTCGAGATTAGCTACAATCGTTAATGGGGTTTTGAGGAAAACAACACAGGAAATGGAATTAAATGGGCTTGTTATTCCTGAAGGGTGGAGAATATATGTCTATACAAGAGAGATCAATTACGACCCGTGTGTATATCCAGAACCACTGACCTTCAATCCATGGCGGTGGCTGGACAAAAGCATGGAAACACAAAACTACTTCTTCATATTTGGGGGAGGCACTAGGCAGTGTCCTGGAAAGGAGCTAGGAATAGCAGAGATTTCTACCTTCCTTCATTACTTTGTAACTAGATACAGGTGGGATGAAGTTGGAGGAGATAAACTGATGAAATTCCCAAGAGTTGAAGCACCAGATGGGCTTCACATTAGGGTTTCAACCAACAAAATTAACTCATGTGCATAA

Network for GWHGAAZE014450

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	35	447	2.10E-57

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09590	CYP85A1, BR6OX1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.315
	SRR3591706	second leaf	0.621
	SRR3591707	mature leaf	0.480
	SRR3591708	Shoot apex	2.138
	SRR3591709	Stem	1.172
	SRR3591710	White floral bud	16.883
	SRR3591711	White flower	11.808
	SRR3591712	Green floral bud	6.193
	SRR3591713	Yellow flower	9.762
SRP173429	SRR8316895	Juvenile bud stage	2.518
	SRR8316896	Juvenile bud stage	4.593
	SRR8316897	Juvenile bud stage	1.575
	SRR8316894	Third green stage	2.704
	SRR8316900	Third green stage	3.593
	SRR8316901	Third green stage	4.991
	SRR8316898	Complete white stage	6.726
	SRR8316899	Complete white stage	3.779
	SRR8316903	Complete white stage	6.701
	SRR8316902	Silver flowering stage	12.096
	SRR8316904	Silver flowering stage	19.826
	SRR8316905	Silver flowering stage	9.298
	SRR8316906	Gold flowering stage	21.598
	SRR8316907	Gold flowering stage	16.621
	SRR8316908	Gold flowering stage	23.592
SRP132670	SRR6706286	Control	2.108
	SRR6706287	Light intensity 50%	2.709
	SRR6706288	Light intensity 20%	2.862
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.057
	CNS0095593	Slightly white alabastrum(diploid) 2	2.289
	CNS0095594	Slightly white alabastrum(diploid) 3	1.917
	CNS0095595	Whole white alabastrum(diploid) 2	2.964
	CNS0095596	Whole white alabastrum(diploid) 3	1.260
	CNS0095597	Whole white alabastrum(diploid) 4	0.680
	CNS0095598	Silvery flower (diploied) 1	4.657
	CNS0095599	Silvery flower (diploied) 2	5.563
	CNS0095600	Silvery flower (diploied) 3	5.304
	CNS0095601	Golden flower (diploid) 1	2.017
	CNS0095602	Golden flower (diploid) 2	2.325
	CNS0095603	Golden flower (diploid) 3	2.052
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.161
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.490
	CNS0095606	Slightly white alabastrum(tetraploid) 3	11.092
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.925
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.924
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.165
	CNS0095610	Silvery flower (tetraploid) 1	3.147
	CNS0095611	Silvery flower (tetraploid) 2	4.962
	CNS0095612	Silvery flower (tetraploid) 3	54.336
	CNS0095613	Golden flower (tetraploid) 1	5.483
	CNS0095614	Golden flower (tetraploid) 2	3.708
	CNS0095615	Golden flower (tetraploid) 3	3.933
CRA001975	CRR073297	Stem 1	3.186
	CRR073298	Stem 2	4.738
	CRR073299	Stem 3	1.888
	CRR073300	Leaf 1	3.855
	CRR073301	Leaf 2	3.176
	CRR073302	Leaf 3	2.863
	CRR073303	Juvenile bud 1	1.291
	CRR073304	Juvenile bud 2	1.506
	CRR073305	Juvenile bud 3	0.711
	CRR073306	Third green 1	2.603
	CRR073307	Third green 2	1.616
	CRR073308	Third green 3	2.235
	CRR073309	Second white 1	2.852
	CRR073310	Second white 2	5.185
	CRR073311	Second white 3	3.149
	CRR073312	Silver flowering 1	0.699
	CRR073313	Silver flowering 2	0.435
	CRR073314	Silver flowering 3	0.354
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.013
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.247
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.180