Detail information of GWHGAAZE014252


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO81190.13.03982E-49hypothetical protein CISIN_1g007452mg [Citrus sinensis]
trEMBLtr|A0A067GRA9|A0A067GRA9_CITSI1E-49Uncharacterized protein {ECO:0000313|EMBL:KDO81190.1}
TAIR10AT1G09710.29E-24Homeodomain-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene88008018802485+
GWHAAZE00000004mRNA88008018802485+
GWHAAZE00000004exon88008018800878+
GWHAAZE00000004exon88011918801277+
GWHAAZE00000004exon88020248802485+
GWHAAZE00000004CDS88008018800878+
GWHAAZE00000004CDS88011918801277+
GWHAAZE00000004CDS88020248802485+
Transcript Sequence

Network for GWHGAAZE014252

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding1391743.80E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.177
SRR3591706second leaf6.213
SRR3591707mature leaf5.303
SRR3591708Shoot apex8.361
SRR3591709Stem5.323
SRR3591710White floral bud2.703
SRR3591711White flower3.570
SRR3591712Green floral bud3.692
SRR3591713Yellow flower4.741
SRP173429 SRR8316895Juvenile bud stage 5.941
SRR8316896Juvenile bud stage 7.267
SRR8316897Juvenile bud stage 4.323
SRR8316894Third green stage 3.401
SRR8316900Third green stage 8.070
SRR8316901Third green stage 7.314
SRR8316898Complete white stage 2.365
SRR8316899Complete white stage 8.414
SRR8316903Complete white stage 3.807
SRR8316902Silver flowering stage2.797
SRR8316904Silver flowering stage4.386
SRR8316905Silver flowering stage1.935
SRR8316906Gold flowering stage 6.605
SRR8316907Gold flowering stage 5.646
SRR8316908Gold flowering stage 9.235
SRP132670SRR6706286Control2.165
SRR6706287Light intensity 50%3.132
SRR6706288Light intensity 20%2.676
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.252
CNS0095593Slightly white alabastrum(diploid) 24.383
CNS0095594Slightly white alabastrum(diploid) 34.407
CNS0095595Whole white alabastrum(diploid) 23.846
CNS0095596Whole white alabastrum(diploid) 34.879
CNS0095597Whole white alabastrum(diploid) 43.452
CNS0095598Silvery flower (diploied) 14.623
CNS0095599Silvery flower (diploied) 26.041
CNS0095600Silvery flower (diploied) 38.123
CNS0095601Golden flower (diploid) 16.506
CNS0095602Golden flower (diploid) 27.175
CNS0095603Golden flower (diploid) 37.101
CNS0095604Slightly white alabastrum(tetraploid) 16.146
CNS0095605Slightly white alabastrum(tetraploid) 24.592
CNS0095606Slightly white alabastrum(tetraploid) 310.017
CNS0095607Whole white alabastrum(tetraploid) 14.510
CNS0095608Whole white alabastrum(tetraploid) 22.713
CNS0095609Whole white alabastrum(tetraploid) 36.816
CNS0095610Silvery flower (tetraploid) 19.239
CNS0095611Silvery flower (tetraploid) 28.943
CNS0095612Silvery flower (tetraploid) 35.277
CNS0095613Golden flower (tetraploid) 15.217
CNS0095614Golden flower (tetraploid) 28.111
CNS0095615Golden flower (tetraploid) 36.491
CRA001975CRR073297Stem 16.717
CRR073298Stem 27.012
CRR073299Stem 37.962
CRR073300Leaf 17.656
CRR073301Leaf 24.888
CRR073302Leaf 34.158
CRR073303Juvenile bud 14.201
CRR073304Juvenile bud 23.466
CRR073305Juvenile bud 34.595
CRR073306Third green 12.653
CRR073307Third green 20.635
CRR073308Third green 31.825
CRR073309Second white 11.476
CRR073310Second white 22.690
CRR073311Second white 34.092
CRR073312Silver flowering 12.375
CRR073313Silver flowering 23.528
CRR073314Silver flowering 31.967
CRR073315Gold flowering 14.712
CRR073316Gold flowering 26.132
CRR073317Gold flowering 33.029
CRR073318Tawny withering 15.653
CRR073319Tawny withering 26.546
CRR073320Tawny withering 35.075