Detail information of GWHGAAZE014178


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285384.10PREDICTED: heptahelical transmembrane protein 4 isoform X1 [Vitis vinifera]
Swissprottr|Q9SZG0|HHP4_ARATH0Heptahelical transmembrane protein 4
trEMBLtr|E0CP07|E0CP07_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI19385.3}
TAIR10AT4G37680.25E-155heptahelical protein 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene72390087241008+
GWHAAZE00000004mRNA72390087241008+
GWHAAZE00000004exon72390087239288+
GWHAAZE00000004exon72397347240055+
GWHAAZE00000004exon72401537241008+
GWHAAZE00000004CDS72390087239288+
GWHAAZE00000004CDS72397347240055+
GWHAAZE00000004CDS72401537240803+
GWHAAZE00000004three_prime_UTR72408047241008+
Transcript Sequence

Network for GWHGAAZE014178

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03006.21HlyIII834023.10E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07297ADIPOR AMPK signaling pathway map04152
Adipocytokine signaling pathwaymap04920
Longevity regulating pathwaymap04211

Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.449
SRR3591706second leaf0.988
SRR3591707mature leaf0.991
SRR3591708Shoot apex0.285
SRR3591709Stem2.578
SRR3591710White floral bud29.477
SRR3591711White flower5.393
SRR3591712Green floral bud30.443
SRR3591713Yellow flower2.727
SRP173429 SRR8316895Juvenile bud stage 1.308
SRR8316896Juvenile bud stage 2.737
SRR8316897Juvenile bud stage 3.281
SRR8316894Third green stage 1.310
SRR8316900Third green stage 5.809
SRR8316901Third green stage 4.994
SRR8316898Complete white stage 0.373
SRR8316899Complete white stage 2.157
SRR8316903Complete white stage 0.894
SRR8316902Silver flowering stage0.465
SRR8316904Silver flowering stage0.760
SRR8316905Silver flowering stage0.224
SRR8316906Gold flowering stage 0.273
SRR8316907Gold flowering stage 0.526
SRR8316908Gold flowering stage 3.304
SRP132670SRR6706286Control3.357
SRR6706287Light intensity 50%2.790
SRR6706288Light intensity 20%2.095
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.637
CNS0095593Slightly white alabastrum(diploid) 22.833
CNS0095594Slightly white alabastrum(diploid) 35.082
CNS0095595Whole white alabastrum(diploid) 29.975
CNS0095596Whole white alabastrum(diploid) 312.607
CNS0095597Whole white alabastrum(diploid) 414.728
CNS0095598Silvery flower (diploied) 11.692
CNS0095599Silvery flower (diploied) 22.139
CNS0095600Silvery flower (diploied) 31.371
CNS0095601Golden flower (diploid) 11.109
CNS0095602Golden flower (diploid) 21.501
CNS0095603Golden flower (diploid) 31.360
CNS0095604Slightly white alabastrum(tetraploid) 117.091
CNS0095605Slightly white alabastrum(tetraploid) 216.537
CNS0095606Slightly white alabastrum(tetraploid) 32.444
CNS0095607Whole white alabastrum(tetraploid) 140.994
CNS0095608Whole white alabastrum(tetraploid) 251.735
CNS0095609Whole white alabastrum(tetraploid) 320.872
CNS0095610Silvery flower (tetraploid) 12.128
CNS0095611Silvery flower (tetraploid) 24.275
CNS0095612Silvery flower (tetraploid) 35.615
CNS0095613Golden flower (tetraploid) 12.618
CNS0095614Golden flower (tetraploid) 21.161
CNS0095615Golden flower (tetraploid) 33.651
CRA001975CRR073297Stem 11.236
CRR073298Stem 21.407
CRR073299Stem 31.378
CRR073300Leaf 12.877
CRR073301Leaf 21.778
CRR073302Leaf 32.107
CRR073303Juvenile bud 12.338
CRR073304Juvenile bud 22.634
CRR073305Juvenile bud 32.910
CRR073306Third green 11.275
CRR073307Third green 20.863
CRR073308Third green 31.705
CRR073309Second white 10.000
CRR073310Second white 20.107
CRR073311Second white 30.214
CRR073312Silver flowering 11.048
CRR073313Silver flowering 20.288
CRR073314Silver flowering 30.977
CRR073315Gold flowering 10.742
CRR073316Gold flowering 20.461
CRR073317Gold flowering 30.455
CRR073318Tawny withering 11.383
CRR073319Tawny withering 20.871
CRR073320Tawny withering 30.526