Detail information of GWHGAAZE014113


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002282817.11.73768E-89PREDICTED: transcription factor HEC1 [Vitis vinifera]
Swissprottr|Q9FHA7|HEC1_ARATH5E-46Transcription factor HEC1
trEMBLtr|E0CPU4|E0CPU4_VITVI6E-90Putative uncharacterized protein {ECO:0000313|EMBL:CBI19507.3}
TAIR10AT5G67060.14E-34basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene60003246001025-
GWHAAZE00000004mRNA60003246001025-
GWHAAZE00000004exon60003246001025-
GWHAAZE00000004CDS60003246001025-
Transcript Sequence

Network for GWHGAAZE014113

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH1421821.30E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.596
SRR3591709Stem0.000
SRR3591710White floral bud0.298
SRR3591711White flower0.850
SRR3591712Green floral bud0.315
SRR3591713Yellow flower0.639
SRP173429 SRR8316895Juvenile bud stage 0.062
SRR8316896Juvenile bud stage 0.129
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.143
SRR8316900Third green stage 0.328
SRR8316901Third green stage 0.271
SRR8316898Complete white stage 0.169
SRR8316899Complete white stage 0.210
SRR8316903Complete white stage 0.127
SRR8316902Silver flowering stage0.052
SRR8316904Silver flowering stage0.087
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.069
SRR8316907Gold flowering stage 0.033
SRR8316908Gold flowering stage 0.368
SRP132670SRR6706286Control0.396
SRR6706287Light intensity 50%0.218
SRR6706288Light intensity 20%0.170
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.980
CNS0095593Slightly white alabastrum(diploid) 20.633
CNS0095594Slightly white alabastrum(diploid) 31.880
CNS0095595Whole white alabastrum(diploid) 20.191
CNS0095596Whole white alabastrum(diploid) 30.351
CNS0095597Whole white alabastrum(diploid) 40.768
CNS0095598Silvery flower (diploied) 10.827
CNS0095599Silvery flower (diploied) 21.082
CNS0095600Silvery flower (diploied) 30.034
CNS0095601Golden flower (diploid) 10.521
CNS0095602Golden flower (diploid) 20.891
CNS0095603Golden flower (diploid) 30.710
CNS0095604Slightly white alabastrum(tetraploid) 10.535
CNS0095605Slightly white alabastrum(tetraploid) 20.705
CNS0095606Slightly white alabastrum(tetraploid) 30.212
CNS0095607Whole white alabastrum(tetraploid) 10.371
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.128
CNS0095610Silvery flower (tetraploid) 10.154
CNS0095611Silvery flower (tetraploid) 20.482
CNS0095612Silvery flower (tetraploid) 30.187
CNS0095613Golden flower (tetraploid) 10.242
CNS0095614Golden flower (tetraploid) 20.475
CNS0095615Golden flower (tetraploid) 30.194
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.249
CRR073299Stem 30.674
CRR073300Leaf 10.138
CRR073301Leaf 20.178
CRR073302Leaf 30.730
CRR073303Juvenile bud 10.072
CRR073304Juvenile bud 20.085
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.054
CRR073308Third green 30.000
CRR073309Second white 10.193
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000