Detail information of GWHGAAZE014105


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFO84070.11.61154E-61alpha-amylase [Actinidia chinensis]
Swissprottr|P17859|AMYA_VIGMU3E-53Alpha-amylase (Precursor)
trEMBLtr|S4SLG7|S4SLG7_ACTCH6E-62Alpha-amylase {ECO:0000256|RuleBase:RU361134}
TAIR10AT4G25000.11E-40alpha-amylase-like

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene58090335812877-
GWHAAZE00000004mRNA58090335812877-
GWHAAZE00000004exon58127965812877-
GWHAAZE00000004exon58110525811410-
GWHAAZE00000004exon58107755810974-
GWHAAZE00000004exon58092155809331-
GWHAAZE00000004exon58090335809108-
GWHAAZE00000004CDS58127965812877-
GWHAAZE00000004CDS58110525811410-
GWHAAZE00000004CDS58107755810974-
GWHAAZE00000004CDS58092155809331-
GWHAAZE00000004CDS58090335809108-
Transcript Sequence

Network for GWHGAAZE014105

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02036.18SCP22192692.00E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01176AMY, amyA, malS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Pancreatic secretionmap04972
Carbohydrate digestion and absorptionmap04973

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.019
SRR3591706second leaf0.155
SRR3591707mature leaf0.070
SRR3591708Shoot apex0.037
SRR3591709Stem0.053
SRR3591710White floral bud0.183
SRR3591711White flower0.210
SRR3591712Green floral bud0.180
SRR3591713Yellow flower0.273
SRP173429 SRR8316895Juvenile bud stage 0.388
SRR8316896Juvenile bud stage 0.611
SRR8316897Juvenile bud stage 0.598
SRR8316894Third green stage 0.417
SRR8316900Third green stage 1.895
SRR8316901Third green stage 1.413
SRR8316898Complete white stage 0.070
SRR8316899Complete white stage 0.978
SRR8316903Complete white stage 0.409
SRR8316902Silver flowering stage0.090
SRR8316904Silver flowering stage0.200
SRR8316905Silver flowering stage0.086
SRR8316906Gold flowering stage 0.218
SRR8316907Gold flowering stage 0.160
SRR8316908Gold flowering stage 2.332
SRP132670SRR6706286Control1.382
SRR6706287Light intensity 50%1.306
SRR6706288Light intensity 20%1.139
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.683
CNS0095593Slightly white alabastrum(diploid) 22.059
CNS0095594Slightly white alabastrum(diploid) 31.294
CNS0095595Whole white alabastrum(diploid) 21.162
CNS0095596Whole white alabastrum(diploid) 31.008
CNS0095597Whole white alabastrum(diploid) 40.962
CNS0095598Silvery flower (diploied) 10.291
CNS0095599Silvery flower (diploied) 20.200
CNS0095600Silvery flower (diploied) 30.262
CNS0095601Golden flower (diploid) 10.112
CNS0095602Golden flower (diploid) 20.288
CNS0095603Golden flower (diploid) 30.188
CNS0095604Slightly white alabastrum(tetraploid) 10.058
CNS0095605Slightly white alabastrum(tetraploid) 20.183
CNS0095606Slightly white alabastrum(tetraploid) 30.162
CNS0095607Whole white alabastrum(tetraploid) 10.131
CNS0095608Whole white alabastrum(tetraploid) 20.232
CNS0095609Whole white alabastrum(tetraploid) 30.212
CNS0095610Silvery flower (tetraploid) 10.113
CNS0095611Silvery flower (tetraploid) 20.030
CNS0095612Silvery flower (tetraploid) 30.029
CNS0095613Golden flower (tetraploid) 10.113
CNS0095614Golden flower (tetraploid) 20.138
CNS0095615Golden flower (tetraploid) 30.166
CRA001975CRR073297Stem 11.061
CRR073298Stem 21.372
CRR073299Stem 31.181
CRR073300Leaf 11.525
CRR073301Leaf 21.623
CRR073302Leaf 31.662
CRR073303Juvenile bud 10.840
CRR073304Juvenile bud 20.848
CRR073305Juvenile bud 30.776
CRR073306Third green 13.539
CRR073307Third green 20.094
CRR073308Third green 31.362
CRR073309Second white 10.147
CRR073310Second white 20.000
CRR073311Second white 30.047
CRR073312Silver flowering 10.013
CRR073313Silver flowering 20.093
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.099
CRR073316Gold flowering 20.989
CRR073317Gold flowering 30.726
CRR073318Tawny withering 11.170
CRR073319Tawny withering 20.792
CRR073320Tawny withering 30.935