Detail information of GWHGAAZE013969


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002281804.10PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Vitis vinifera]
Swissprottr|Q9FJZ3|MAN7_ARATH0Mannan endo-1,4-beta-mannosidase 7 (Precursor)
trEMBLtr|E0CQG0|E0CQG0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI19729.3}
TAIR10AT5G66460.15E-158Glycosyl hydrolase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene36817443684826-
GWHAAZE00000004mRNA36817443684826-
GWHAAZE00000004exon36817443682173-
GWHAAZE00000004exon36822633682465-
GWHAAZE00000004exon36826113682733-
GWHAAZE00000004exon36840183684212-
GWHAAZE00000004exon36843183684626-
GWHAAZE00000004exon36848213684826-
GWHAAZE00000004CDS36848213684826-
GWHAAZE00000004CDS36843183684626-
GWHAAZE00000004CDS36840183684212-
GWHAAZE00000004CDS36826113682733-
GWHAAZE00000004CDS36822633682465-
GWHAAZE00000004CDS36817443682173-
Transcript Sequence

Network for GWHGAAZE013969

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00150.19Cellulase633372.10E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K19355MAN Metabolic pathways map01100
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE013969.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 302.557.51012.51517.52022.52527.53032.5353…37.5Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.919
SRR3591706second leaf18.935
SRR3591707mature leaf24.123
SRR3591708Shoot apex13.255
SRR3591709Stem33.688
SRR3591710White floral bud5.218
SRR3591711White flower5.804
SRR3591712Green floral bud4.811
SRR3591713Yellow flower0.661
SRP173429 SRR8316895Juvenile bud stage 11.576
SRR8316896Juvenile bud stage 11.140
SRR8316897Juvenile bud stage 4.063
SRR8316894Third green stage 6.773
SRR8316900Third green stage 7.766
SRR8316901Third green stage 9.123
SRR8316898Complete white stage 1.835
SRR8316899Complete white stage 10.785
SRR8316903Complete white stage 6.264
SRR8316902Silver flowering stage0.870
SRR8316904Silver flowering stage1.342
SRR8316905Silver flowering stage0.235
SRR8316906Gold flowering stage 0.745
SRR8316907Gold flowering stage 0.717
SRR8316908Gold flowering stage 1.647
SRP132670SRR6706286Control2.070
SRR6706287Light intensity 50%2.042
SRR6706288Light intensity 20%2.230
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.404
CNS0095593Slightly white alabastrum(diploid) 211.603
CNS0095594Slightly white alabastrum(diploid) 315.612
CNS0095595Whole white alabastrum(diploid) 28.173
CNS0095596Whole white alabastrum(diploid) 32.958
CNS0095597Whole white alabastrum(diploid) 44.457
CNS0095598Silvery flower (diploied) 126.430
CNS0095599Silvery flower (diploied) 213.334
CNS0095600Silvery flower (diploied) 34.811
CNS0095601Golden flower (diploid) 19.520
CNS0095602Golden flower (diploid) 24.480
CNS0095603Golden flower (diploid) 35.509
CNS0095604Slightly white alabastrum(tetraploid) 17.933
CNS0095605Slightly white alabastrum(tetraploid) 27.965
CNS0095606Slightly white alabastrum(tetraploid) 312.485
CNS0095607Whole white alabastrum(tetraploid) 16.804
CNS0095608Whole white alabastrum(tetraploid) 22.046
CNS0095609Whole white alabastrum(tetraploid) 34.546
CNS0095610Silvery flower (tetraploid) 12.251
CNS0095611Silvery flower (tetraploid) 23.164
CNS0095612Silvery flower (tetraploid) 31.797
CNS0095613Golden flower (tetraploid) 12.528
CNS0095614Golden flower (tetraploid) 21.758
CNS0095615Golden flower (tetraploid) 30.265
CRA001975CRR073297Stem 14.717
CRR073298Stem 24.291
CRR073299Stem 32.551
CRR073300Leaf 11.459
CRR073301Leaf 23.798
CRR073302Leaf 31.304
CRR073303Juvenile bud 10.970
CRR073304Juvenile bud 20.380
CRR073305Juvenile bud 31.553
CRR073306Third green 10.715
CRR073307Third green 20.645
CRR073308Third green 30.735
CRR073309Second white 10.269
CRR073310Second white 21.177
CRR073311Second white 30.527
CRR073312Silver flowering 10.037
CRR073313Silver flowering 20.048
CRR073314Silver flowering 30.160
CRR073315Gold flowering 16.011
CRR073316Gold flowering 22.100
CRR073317Gold flowering 32.324
CRR073318Tawny withering 110.208
CRR073319Tawny withering 214.576
CRR073320Tawny withering 312.282