Detail information of GWHGAAZE013866


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006435253.10hypothetical protein CICLE_v10000897mg [Citrus clementina]
Swissprottr|Q8RWL2|CDPKT_ARATH0Calcium-dependent protein kinase 29
trEMBLtr|V4SL58|V4SL58_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR48493.1}
TAIR10AT1G76040.20calcium-dependent protein kinase 29

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene17782111784504-
GWHAAZE00000004mRNA17782111784504-
GWHAAZE00000004exon17838261784504-
GWHAAZE00000004exon17814091781552-
GWHAAZE00000004exon17811261781278-
GWHAAZE00000004exon17809221781037-
GWHAAZE00000004exon17806671780834-
GWHAAZE00000004exon17804381780565-
GWHAAZE00000004exon17784551778554-
GWHAAZE00000004exon17782111778353-
GWHAAZE00000004CDS17838261784504-
GWHAAZE00000004CDS17814091781552-
GWHAAZE00000004CDS17811261781278-
GWHAAZE00000004CDS17809221781037-
GWHAAZE00000004CDS17806671780834-
GWHAAZE00000004CDS17804381780565-
GWHAAZE00000004CDS17784551778554-
GWHAAZE00000004CDS17782731778353-
GWHAAZE00000004three_prime_UTR17782111778272-
Transcript Sequence

Network for GWHGAAZE013866

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase723303.30E-74
PF13499.7EF-hand_73784383.20E-12
PF13499.7EF-hand_74495109.90E-15
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.460
SRR3591706second leaf5.030
SRR3591707mature leaf2.644
SRR3591708Shoot apex3.373
SRR3591709Stem18.695
SRR3591710White floral bud4.472
SRR3591711White flower7.130
SRR3591712Green floral bud7.898
SRR3591713Yellow flower2.532
SRP173429 SRR8316895Juvenile bud stage 6.028
SRR8316896Juvenile bud stage 8.748
SRR8316897Juvenile bud stage 2.450
SRR8316894Third green stage 3.407
SRR8316900Third green stage 7.253
SRR8316901Third green stage 8.625
SRR8316898Complete white stage 1.664
SRR8316899Complete white stage 14.971
SRR8316903Complete white stage 3.441
SRR8316902Silver flowering stage0.584
SRR8316904Silver flowering stage1.000
SRR8316905Silver flowering stage0.448
SRR8316906Gold flowering stage 4.189
SRR8316907Gold flowering stage 0.549
SRR8316908Gold flowering stage 2.845
SRP132670SRR6706286Control7.701
SRR6706287Light intensity 50%5.295
SRR6706288Light intensity 20%4.134
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.213
CNS0095593Slightly white alabastrum(diploid) 212.081
CNS0095594Slightly white alabastrum(diploid) 39.821
CNS0095595Whole white alabastrum(diploid) 25.196
CNS0095596Whole white alabastrum(diploid) 34.512
CNS0095597Whole white alabastrum(diploid) 44.038
CNS0095598Silvery flower (diploied) 110.625
CNS0095599Silvery flower (diploied) 212.187
CNS0095600Silvery flower (diploied) 35.267
CNS0095601Golden flower (diploid) 115.279
CNS0095602Golden flower (diploid) 214.146
CNS0095603Golden flower (diploid) 312.804
CNS0095604Slightly white alabastrum(tetraploid) 16.921
CNS0095605Slightly white alabastrum(tetraploid) 26.223
CNS0095606Slightly white alabastrum(tetraploid) 37.712
CNS0095607Whole white alabastrum(tetraploid) 14.512
CNS0095608Whole white alabastrum(tetraploid) 22.708
CNS0095609Whole white alabastrum(tetraploid) 32.319
CNS0095610Silvery flower (tetraploid) 12.300
CNS0095611Silvery flower (tetraploid) 22.077
CNS0095612Silvery flower (tetraploid) 31.345
CNS0095613Golden flower (tetraploid) 11.029
CNS0095614Golden flower (tetraploid) 24.231
CNS0095615Golden flower (tetraploid) 31.298
CRA001975CRR073297Stem 15.367
CRR073298Stem 26.221
CRR073299Stem 34.515
CRR073300Leaf 13.656
CRR073301Leaf 24.781
CRR073302Leaf 32.435
CRR073303Juvenile bud 11.455
CRR073304Juvenile bud 20.292
CRR073305Juvenile bud 33.416
CRR073306Third green 10.290
CRR073307Third green 20.557
CRR073308Third green 30.459
CRR073309Second white 10.049
CRR073310Second white 20.168
CRR073311Second white 30.000
CRR073312Silver flowering 10.174
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.081
CRR073316Gold flowering 21.234
CRR073317Gold flowering 31.378
CRR073318Tawny withering 15.134
CRR073319Tawny withering 22.800
CRR073320Tawny withering 34.245