Detail information of GWHGAAZE013815


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009624788.10PREDICTED: catalase isozyme 3 [Nicotiana tomentosiformis]
Swissprottr|O24339|CATA_SOLAP0Catalase
trEMBLtr|L0SQ48|L0SQ48_TOBAC0Catalase {ECO:0000256|RuleBase:RU000498}
TAIR10AT4G35090.10catalase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene985448992103-
GWHAAZE00000004mRNA985448992103-
GWHAAZE00000004exon985448985507-
GWHAAZE00000004exon985620985713-
GWHAAZE00000004exon985798985865-
GWHAAZE00000004exon987955988044-
GWHAAZE00000004exon988181988957-
GWHAAZE00000004exon990264990541-
GWHAAZE00000004exon992001992103-
GWHAAZE00000004CDS992001992103-
GWHAAZE00000004CDS990264990541-
GWHAAZE00000004CDS988181988957-
GWHAAZE00000004CDS987955988044-
GWHAAZE00000004CDS985798985865-
GWHAAZE00000004CDS985620985713-
GWHAAZE00000004CDS985448985507-
Transcript Sequence

Network for GWHGAAZE013815

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00199.20Catalase153957.20E-172
PF06628.13Catalase-rel4204831.10E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03781katE, CAT, catB, srpA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Tryptophan metabolismmap00380
MAPK signaling pathway - plantmap04016
MAPK signaling pathway - yeastmap04011
FoxO signaling pathwaymap04068
Peroxisomemap04146
Longevity regulating pathwaymap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0006979biological_processresponse to oxidative stress
GO:0004096molecular_functioncatalase activity
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.213
SRR3591706second leaf30.930
SRR3591707mature leaf284.036
SRR3591708Shoot apex0.785
SRR3591709Stem0.000
SRR3591710White floral bud0.038
SRR3591711White flower0.100
SRR3591712Green floral bud0.251
SRR3591713Yellow flower0.073
SRP173429 SRR8316895Juvenile bud stage 0.341
SRR8316896Juvenile bud stage 0.826
SRR8316897Juvenile bud stage 1.269
SRR8316894Third green stage 0.277
SRR8316900Third green stage 1.791
SRR8316901Third green stage 1.894
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.074
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.227
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.137
SRR8316907Gold flowering stage 0.072
SRR8316908Gold flowering stage 0.091
SRP132670SRR6706286Control1.568
SRR6706287Light intensity 50%1.564
SRR6706288Light intensity 20%1.265
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.460
CNS0095593Slightly white alabastrum(diploid) 21.569
CNS0095594Slightly white alabastrum(diploid) 31.614
CNS0095595Whole white alabastrum(diploid) 22.522
CNS0095596Whole white alabastrum(diploid) 33.475
CNS0095597Whole white alabastrum(diploid) 42.232
CNS0095598Silvery flower (diploied) 10.085
CNS0095599Silvery flower (diploied) 20.732
CNS0095600Silvery flower (diploied) 30.129
CNS0095601Golden flower (diploid) 10.103
CNS0095602Golden flower (diploid) 20.014
CNS0095603Golden flower (diploid) 30.051
CNS0095604Slightly white alabastrum(tetraploid) 112.125
CNS0095605Slightly white alabastrum(tetraploid) 28.991
CNS0095606Slightly white alabastrum(tetraploid) 31.811
CNS0095607Whole white alabastrum(tetraploid) 118.002
CNS0095608Whole white alabastrum(tetraploid) 223.865
CNS0095609Whole white alabastrum(tetraploid) 318.360
CNS0095610Silvery flower (tetraploid) 12.868
CNS0095611Silvery flower (tetraploid) 22.724
CNS0095612Silvery flower (tetraploid) 36.780
CNS0095613Golden flower (tetraploid) 11.272
CNS0095614Golden flower (tetraploid) 21.254
CNS0095615Golden flower (tetraploid) 31.952
CRA001975CRR073297Stem 10.838
CRR073298Stem 20.961
CRR073299Stem 31.393
CRR073300Leaf 10.668
CRR073301Leaf 20.948
CRR073302Leaf 30.473
CRR073303Juvenile bud 12.424
CRR073304Juvenile bud 23.217
CRR073305Juvenile bud 30.451
CRR073306Third green 10.847
CRR073307Third green 22.052
CRR073308Third green 32.382
CRR073309Second white 10.084
CRR073310Second white 20.387
CRR073311Second white 30.272
CRR073312Silver flowering 10.878
CRR073313Silver flowering 20.802
CRR073314Silver flowering 31.783
CRR073315Gold flowering 1193.532
CRR073316Gold flowering 2272.677
CRR073317Gold flowering 3111.610
CRR073318Tawny withering 11.704
CRR073319Tawny withering 21.690
CRR073320Tawny withering 31.314