Detail information of GWHGAAZE013799


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007211276.10hypothetical protein PRUPE_ppa003370mg [Prunus persica]
Swissprottr|Q9FII2|FK117_ARATH0F-box/kelch-repeat protein At5g42350
trEMBLtr|M5X0B1|M5X0B1_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ12475.1}
TAIR10AT5G42350.10Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene742717744459+
GWHAAZE00000004mRNA742717744459+
GWHAAZE00000004exon742717744459+
GWHAAZE00000004CDS742717744459+
Transcript Sequence

Network for GWHGAAZE013799

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box1391753.70E-09
PF01344.26Kelch_12252791.00E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.203
SRR3591706second leaf13.576
SRR3591707mature leaf17.136
SRR3591708Shoot apex18.510
SRR3591709Stem42.947
SRR3591710White floral bud24.295
SRR3591711White flower17.201
SRR3591712Green floral bud21.368
SRR3591713Yellow flower14.360
SRP173429 SRR8316895Juvenile bud stage 9.880
SRR8316896Juvenile bud stage 14.975
SRR8316897Juvenile bud stage 8.520
SRR8316894Third green stage 7.855
SRR8316900Third green stage 19.185
SRR8316901Third green stage 21.141
SRR8316898Complete white stage 6.504
SRR8316899Complete white stage 21.768
SRR8316903Complete white stage 10.489
SRR8316902Silver flowering stage8.060
SRR8316904Silver flowering stage10.370
SRR8316905Silver flowering stage6.003
SRR8316906Gold flowering stage 17.036
SRR8316907Gold flowering stage 17.983
SRR8316908Gold flowering stage 16.205
SRP132670SRR6706286Control17.289
SRR6706287Light intensity 50%18.612
SRR6706288Light intensity 20%18.799
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.611
CNS0095593Slightly white alabastrum(diploid) 212.655
CNS0095594Slightly white alabastrum(diploid) 316.454
CNS0095595Whole white alabastrum(diploid) 214.398
CNS0095596Whole white alabastrum(diploid) 314.077
CNS0095597Whole white alabastrum(diploid) 414.381
CNS0095598Silvery flower (diploied) 19.369
CNS0095599Silvery flower (diploied) 28.329
CNS0095600Silvery flower (diploied) 313.031
CNS0095601Golden flower (diploid) 13.885
CNS0095602Golden flower (diploid) 211.389
CNS0095603Golden flower (diploid) 310.723
CNS0095604Slightly white alabastrum(tetraploid) 117.526
CNS0095605Slightly white alabastrum(tetraploid) 215.632
CNS0095606Slightly white alabastrum(tetraploid) 316.577
CNS0095607Whole white alabastrum(tetraploid) 115.623
CNS0095608Whole white alabastrum(tetraploid) 213.002
CNS0095609Whole white alabastrum(tetraploid) 315.038
CNS0095610Silvery flower (tetraploid) 19.884
CNS0095611Silvery flower (tetraploid) 29.878
CNS0095612Silvery flower (tetraploid) 328.412
CNS0095613Golden flower (tetraploid) 16.343
CNS0095614Golden flower (tetraploid) 28.223
CNS0095615Golden flower (tetraploid) 311.618
CRA001975CRR073297Stem 116.855
CRR073298Stem 216.726
CRR073299Stem 315.550
CRR073300Leaf 120.423
CRR073301Leaf 219.969
CRR073302Leaf 320.191
CRR073303Juvenile bud 120.239
CRR073304Juvenile bud 218.491
CRR073305Juvenile bud 320.619
CRR073306Third green 157.931
CRR073307Third green 241.136
CRR073308Third green 346.658
CRR073309Second white 165.175
CRR073310Second white 271.265
CRR073311Second white 373.226
CRR073312Silver flowering 156.715
CRR073313Silver flowering 245.232
CRR073314Silver flowering 333.002
CRR073315Gold flowering 116.141
CRR073316Gold flowering 214.294
CRR073317Gold flowering 312.199
CRR073318Tawny withering 122.936
CRR073319Tawny withering 220.793
CRR073320Tawny withering 333.307