Detail information of GWHGAAZE013791


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002274236.10PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A [Vitis vinifera]
Swissprottr|Q9SFX3|OST1A_ARATH0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A (Precursor)
trEMBLtr|D7UDD5|D7UDD5_VITVI0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 {ECO:0000256|RuleBase:RU361143}
TAIR10AT1G76400.10Ribophorin I

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene614760622580-
GWHAAZE00000004mRNA614760622580-
GWHAAZE00000004exon622467622580-
GWHAAZE00000004exon620953620997-
GWHAAZE00000004exon620141620775-
GWHAAZE00000004exon619903620050-
GWHAAZE00000004exon619641619817-
GWHAAZE00000004exon618173618241-
GWHAAZE00000004exon617966618055-
GWHAAZE00000004exon616507616665-
GWHAAZE00000004exon616195616419-
GWHAAZE00000004exon614760615083-
GWHAAZE00000004five_prime_UTR622551622580-
GWHAAZE00000004CDS622467622550-
GWHAAZE00000004CDS620953620997-
GWHAAZE00000004CDS620141620775-
GWHAAZE00000004CDS619903620050-
GWHAAZE00000004CDS619641619817-
GWHAAZE00000004CDS618173618241-
GWHAAZE00000004CDS617966618055-
GWHAAZE00000004CDS616507616665-
GWHAAZE00000004CDS616195616419-
GWHAAZE00000004CDS614892615083-
GWHAAZE00000004three_prime_UTR614760614891-
Transcript Sequence

Network for GWHGAAZE013791

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04597.15Ribophorin_I214477.40E-146
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12666OST1, RPN1 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0006486biological_processprotein glycosylation
GO:0005783cellular_componentendoplasmic reticulum
GO:0016021cellular_componentintegral component of membrane
GO:0004579molecular_functiondolichyl-diphosphooligosaccharide-protein glycotransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf93.592
SRR3591706second leaf46.958
SRR3591707mature leaf26.033
SRR3591708Shoot apex67.194
SRR3591709Stem57.567
SRR3591710White floral bud54.608
SRR3591711White flower53.377
SRR3591712Green floral bud82.199
SRR3591713Yellow flower39.344
SRP173429 SRR8316895Juvenile bud stage 52.023
SRR8316896Juvenile bud stage 64.911
SRR8316897Juvenile bud stage 36.850
SRR8316894Third green stage 32.944
SRR8316900Third green stage 87.347
SRR8316901Third green stage 75.376
SRR8316898Complete white stage 32.601
SRR8316899Complete white stage 82.776
SRR8316903Complete white stage 42.587
SRR8316902Silver flowering stage24.923
SRR8316904Silver flowering stage31.828
SRR8316905Silver flowering stage14.095
SRR8316906Gold flowering stage 38.289
SRR8316907Gold flowering stage 44.631
SRR8316908Gold flowering stage 45.725
SRP132670SRR6706286Control56.180
SRR6706287Light intensity 50%54.678
SRR6706288Light intensity 20%58.017
CNP0000432CNS0095592Slightly white alabastrum(diploid) 167.976
CNS0095593Slightly white alabastrum(diploid) 267.195
CNS0095594Slightly white alabastrum(diploid) 370.372
CNS0095595Whole white alabastrum(diploid) 265.962
CNS0095596Whole white alabastrum(diploid) 375.481
CNS0095597Whole white alabastrum(diploid) 455.876
CNS0095598Silvery flower (diploied) 143.312
CNS0095599Silvery flower (diploied) 240.916
CNS0095600Silvery flower (diploied) 353.901
CNS0095601Golden flower (diploid) 132.874
CNS0095602Golden flower (diploid) 244.963
CNS0095603Golden flower (diploid) 344.637
CNS0095604Slightly white alabastrum(tetraploid) 182.464
CNS0095605Slightly white alabastrum(tetraploid) 276.307
CNS0095606Slightly white alabastrum(tetraploid) 382.716
CNS0095607Whole white alabastrum(tetraploid) 171.015
CNS0095608Whole white alabastrum(tetraploid) 263.097
CNS0095609Whole white alabastrum(tetraploid) 381.188
CNS0095610Silvery flower (tetraploid) 147.243
CNS0095611Silvery flower (tetraploid) 240.848
CNS0095612Silvery flower (tetraploid) 334.056
CNS0095613Golden flower (tetraploid) 118.171
CNS0095614Golden flower (tetraploid) 238.230
CNS0095615Golden flower (tetraploid) 321.798
CRA001975CRR073297Stem 172.426
CRR073298Stem 266.134
CRR073299Stem 371.520
CRR073300Leaf 177.102
CRR073301Leaf 271.700
CRR073302Leaf 385.984
CRR073303Juvenile bud 183.633
CRR073304Juvenile bud 269.453
CRR073305Juvenile bud 382.058
CRR073306Third green 118.219
CRR073307Third green 218.616
CRR073308Third green 324.100
CRR073309Second white 124.441
CRR073310Second white 219.911
CRR073311Second white 322.390
CRR073312Silver flowering 120.790
CRR073313Silver flowering 217.706
CRR073314Silver flowering 315.023
CRR073315Gold flowering 121.431
CRR073316Gold flowering 229.772
CRR073317Gold flowering 323.737
CRR073318Tawny withering 166.713
CRR073319Tawny withering 256.912
CRR073320Tawny withering 369.895