Gene detail

Detail information of GWHGAAZE013764

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI29304.3	1.3271E-164	unnamed protein product [Vitis vinifera]
trEMBL	tr\|F6HJ96\|F6HJ96_VITVI	5E-164	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB52294.1}
TAIR10	AT3G51980.1	1E-102	ARM repeat superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	107921274	107931326	+
GWHAAZE00000003	mRNA	107921274	107931326	+
GWHAAZE00000003	exon	107921274	107921361	+
GWHAAZE00000003	exon	107923725	107923816	+
GWHAAZE00000003	exon	107927198	107927348	+
GWHAAZE00000003	exon	107928971	107929009	+
GWHAAZE00000003	exon	107929385	107929512	+
GWHAAZE00000003	exon	107929621	107929779	+
GWHAAZE00000003	exon	107930013	107930201	+
GWHAAZE00000003	exon	107931006	107931212	+
GWHAAZE00000003	exon	107931306	107931326	+
GWHAAZE00000003	five_prime_UTR	107921274	107921342	+
GWHAAZE00000003	CDS	107921343	107921361	+
GWHAAZE00000003	CDS	107923725	107923816	+
GWHAAZE00000003	CDS	107927198	107927348	+
GWHAAZE00000003	CDS	107928971	107929009	+
GWHAAZE00000003	CDS	107929385	107929512	+
GWHAAZE00000003	CDS	107929621	107929779	+
GWHAAZE00000003	CDS	107930013	107930201	+
GWHAAZE00000003	CDS	107931006	107931212	+
GWHAAZE00000003	CDS	107931306	107931326	+

Transcript Sequence
>GWHTAAZE013778 TCCTCCTCGGCCGCTCTGCAGTTGAACCAAGCCGACGAATTGGATGGCGGCTTTTCTTCCCTCGATGGCATGTTACAGTGGGCAATAGGCCATTCAGACCCAACAAAGTTGCAGGAAACAGCACAAGAGGTCCAACGTCTTTCCCCCGACGACCTAAAGAAACGTCAAATCGAGATAAAGGAACTGATGGAGAAGCTGAAAATGCCGTCGGATGCACAGTTGATGCAAATTGCAATAGATGACCTGAACAATTCATCTTTGGCTTCCGAAGTTCGTCATCGTGCATTACAGGAACTTTTGATTCTTGTTGAGCCAATAGATAATGCAATTGGGGGTCAGTGGAGTATTGTTGATCCATGTGTCAGAATGGATCTGCACAAACTTGGGGGTATTGCAGCAGTCATAGGAGAACTTAGTAACCCTGACCCAGGGATAAGGACAACTGCTGCGTGGATTCTTGGTAAAGCCAGTCAAAATAACCTTGTTGTTCAAAAGCAGGTACTGGAACTTGGGGCACTGAAGAAGCTGATGATGATGGTAAAATCTAGTTGTATAGAAGAAGGTATCAAAGCATTCTATGCTATTTCAGCCTTGATTAGGAACAATTTAGTCGGGCAGGAATTATTCTGTGCAGAAGCTGGAGGCTTGATGCTTCAGGACATTCTGATCAACTTAAGTATTGATATCAGACTAAGAAAGAAAGCTGTGTTTCTTGTTGCTGATCTGGCGGAAAGTCAACTAGAAACAAGAGATAAAGTAGAGCTACCCTTTTTCAGCAATCGCGTTTTCTTGAAGTCTATGGTTGACCTGACAGCATCAGCTGATGACCTTGATCTACAGGAGAAGGCCCTTCATGCAATTAAGAACCTCTTACAACTCCGGTCAAGTGAAGCTCTGATTTTCAAGGACTTCTGTGGATTGGACGGGGCATTGGAAAGTACAAGGCAACGGTTGCAGCAGTTGATAACAGAGGAGAGTCATAGAGAATATGCAATGGATGTGGAAAGCCTTAGGAGAGAAGTGGAGCTCATTTTTCTTGGAAAGCTGAATGAGGTAATAGAGGTTCCAACATGA

Network for GWHGAAZE013764

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08609.11	Fes1	1	86	3.00E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09562	HSPBP1, FES1	Protein processing in endoplasmic reticulum	map04141

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	49.821
	SRR3591706	second leaf	24.332
	SRR3591707	mature leaf	19.755
	SRR3591708	Shoot apex	33.686
	SRR3591709	Stem	43.182
	SRR3591710	White floral bud	32.087
	SRR3591711	White flower	27.349
	SRR3591712	Green floral bud	41.229
	SRR3591713	Yellow flower	19.052
SRP173429	SRR8316895	Juvenile bud stage	22.810
	SRR8316896	Juvenile bud stage	41.209
	SRR8316897	Juvenile bud stage	17.762
	SRR8316894	Third green stage	16.018
	SRR8316900	Third green stage	36.894
	SRR8316901	Third green stage	35.593
	SRR8316898	Complete white stage	12.363
	SRR8316899	Complete white stage	48.267
	SRR8316903	Complete white stage	23.854
	SRR8316902	Silver flowering stage	10.755
	SRR8316904	Silver flowering stage	16.768
	SRR8316905	Silver flowering stage	7.977
	SRR8316906	Gold flowering stage	26.914
	SRR8316907	Gold flowering stage	25.702
	SRR8316908	Gold flowering stage	34.999
SRP132670	SRR6706286	Control	33.654
	SRR6706287	Light intensity 50%	36.871
	SRR6706288	Light intensity 20%	36.463
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	38.261
	CNS0095593	Slightly white alabastrum(diploid) 2	33.663
	CNS0095594	Slightly white alabastrum(diploid) 3	33.393
	CNS0095595	Whole white alabastrum(diploid) 2	29.686
	CNS0095596	Whole white alabastrum(diploid) 3	25.220
	CNS0095597	Whole white alabastrum(diploid) 4	27.604
	CNS0095598	Silvery flower (diploied) 1	34.870
	CNS0095599	Silvery flower (diploied) 2	22.761
	CNS0095600	Silvery flower (diploied) 3	34.310
	CNS0095601	Golden flower (diploid) 1	32.706
	CNS0095602	Golden flower (diploid) 2	35.962
	CNS0095603	Golden flower (diploid) 3	33.999
	CNS0095604	Slightly white alabastrum(tetraploid) 1	44.703
	CNS0095605	Slightly white alabastrum(tetraploid) 2	40.924
	CNS0095606	Slightly white alabastrum(tetraploid) 3	49.653
	CNS0095607	Whole white alabastrum(tetraploid) 1	35.089
	CNS0095608	Whole white alabastrum(tetraploid) 2	25.920
	CNS0095609	Whole white alabastrum(tetraploid) 3	36.199
	CNS0095610	Silvery flower (tetraploid) 1	32.939
	CNS0095611	Silvery flower (tetraploid) 2	36.923
	CNS0095612	Silvery flower (tetraploid) 3	24.169
	CNS0095613	Golden flower (tetraploid) 1	17.045
	CNS0095614	Golden flower (tetraploid) 2	30.932
	CNS0095615	Golden flower (tetraploid) 3	17.638
CRA001975	CRR073297	Stem 1	39.953
	CRR073298	Stem 2	34.965
	CRR073299	Stem 3	40.684
	CRR073300	Leaf 1	41.891
	CRR073301	Leaf 2	37.256
	CRR073302	Leaf 3	35.523
	CRR073303	Juvenile bud 1	42.498
	CRR073304	Juvenile bud 2	28.955
	CRR073305	Juvenile bud 3	42.450
	CRR073306	Third green 1	6.424
	CRR073307	Third green 2	8.854
	CRR073308	Third green 3	8.859
	CRR073309	Second white 1	13.624
	CRR073310	Second white 2	14.649
	CRR073311	Second white 3	8.689
	CRR073312	Silver flowering 1	4.198
	CRR073313	Silver flowering 2	7.995
	CRR073314	Silver flowering 3	5.335
	CRR073315	Gold flowering 1	17.747
	CRR073316	Gold flowering 2	21.862
	CRR073317	Gold flowering 3	17.237
	CRR073318	Tawny withering 1	40.214
	CRR073319	Tawny withering 2	30.258
	CRR073320	Tawny withering 3	35.323