Detail information of GWHGAAZE013692


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010655353.10PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase 4 isoform X1 [Vitis vinifera]
Swissprottr|P28643|FABG_CUPLA2E-1573-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (Precursor)
trEMBLtr|D7TAP7|D7TAP7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27570.3}
TAIR10AT1G24360.16E-101NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene106471532106476238-
GWHAAZE00000003mRNA106471532106476238-
GWHAAZE00000003exon106471532106471564-
GWHAAZE00000003exon106471774106471856-
GWHAAZE00000003exon106472887106472980-
GWHAAZE00000003exon106473090106473224-
GWHAAZE00000003exon106473330106473362-
GWHAAZE00000003exon106473457106473551-
GWHAAZE00000003exon106473633106473678-
GWHAAZE00000003exon106473766106473846-
GWHAAZE00000003exon106474324106474377-
GWHAAZE00000003exon106474938106475083-
GWHAAZE00000003exon106476025106476238-
GWHAAZE00000003CDS106476025106476238-
GWHAAZE00000003CDS106474938106475083-
GWHAAZE00000003CDS106474324106474377-
GWHAAZE00000003CDS106473766106473846-
GWHAAZE00000003CDS106473633106473678-
GWHAAZE00000003CDS106473457106473551-
GWHAAZE00000003CDS106473330106473362-
GWHAAZE00000003CDS106473090106473224-
GWHAAZE00000003CDS106472887106472980-
GWHAAZE00000003CDS106471774106471856-
GWHAAZE00000003CDS106471532106471564-
Transcript Sequence

Network for GWHGAAZE013692

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.7adh_short_C21013351.30E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00059fabG, OAR1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Biotin metabolismmap00780
Prodigiosin biosynthesismap00333

Gene Ontology

GO term OntologyName
GO:0006633biological_processfatty acid biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0004316molecular_function3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0051287molecular_functionNAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf85.832
SRR3591706second leaf123.515
SRR3591707mature leaf24.250
SRR3591708Shoot apex131.755
SRR3591709Stem31.685
SRR3591710White floral bud41.521
SRR3591711White flower25.833
SRR3591712Green floral bud112.309
SRR3591713Yellow flower19.894
SRP173429 SRR8316895Juvenile bud stage 69.683
SRR8316896Juvenile bud stage 109.833
SRR8316897Juvenile bud stage 40.633
SRR8316894Third green stage 45.405
SRR8316900Third green stage 201.355
SRR8316901Third green stage 168.915
SRR8316898Complete white stage 26.144
SRR8316899Complete white stage 134.458
SRR8316903Complete white stage 32.174
SRR8316902Silver flowering stage17.176
SRR8316904Silver flowering stage18.306
SRR8316905Silver flowering stage10.119
SRR8316906Gold flowering stage 39.507
SRR8316907Gold flowering stage 32.757
SRR8316908Gold flowering stage 38.109
SRP132670SRR6706286Control126.961
SRR6706287Light intensity 50%127.887
SRR6706288Light intensity 20%144.448
CNP0000432CNS0095592Slightly white alabastrum(diploid) 177.357
CNS0095593Slightly white alabastrum(diploid) 276.217
CNS0095594Slightly white alabastrum(diploid) 365.760
CNS0095595Whole white alabastrum(diploid) 273.771
CNS0095596Whole white alabastrum(diploid) 384.194
CNS0095597Whole white alabastrum(diploid) 463.760
CNS0095598Silvery flower (diploied) 148.858
CNS0095599Silvery flower (diploied) 247.945
CNS0095600Silvery flower (diploied) 331.739
CNS0095601Golden flower (diploid) 139.262
CNS0095602Golden flower (diploid) 227.941
CNS0095603Golden flower (diploid) 329.383
CNS0095604Slightly white alabastrum(tetraploid) 194.454
CNS0095605Slightly white alabastrum(tetraploid) 281.763
CNS0095606Slightly white alabastrum(tetraploid) 3161.912
CNS0095607Whole white alabastrum(tetraploid) 157.353
CNS0095608Whole white alabastrum(tetraploid) 253.575
CNS0095609Whole white alabastrum(tetraploid) 3152.410
CNS0095610Silvery flower (tetraploid) 132.820
CNS0095611Silvery flower (tetraploid) 239.994
CNS0095612Silvery flower (tetraploid) 329.692
CNS0095613Golden flower (tetraploid) 115.645
CNS0095614Golden flower (tetraploid) 231.685
CNS0095615Golden flower (tetraploid) 38.351
CRA001975CRR073297Stem 1121.494
CRR073298Stem 2117.704
CRR073299Stem 377.244
CRR073300Leaf 1169.686
CRR073301Leaf 2170.932
CRR073302Leaf 3185.361
CRR073303Juvenile bud 1128.970
CRR073304Juvenile bud 2115.309
CRR073305Juvenile bud 365.906
CRR073306Third green 122.717
CRR073307Third green 212.882
CRR073308Third green 313.513
CRR073309Second white 19.040
CRR073310Second white 29.414
CRR073311Second white 37.893
CRR073312Silver flowering 17.157
CRR073313Silver flowering 25.629
CRR073314Silver flowering 36.928
CRR073315Gold flowering 151.330
CRR073316Gold flowering 269.056
CRR073317Gold flowering 330.059
CRR073318Tawny withering 190.271
CRR073319Tawny withering 251.845
CRR073320Tawny withering 392.990