Detail information of GWHGAAZE013667


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU30605.11.99678E-53hypothetical protein MIMGU_mgv1a011710mg [Erythranthe guttata]
Swissprottr|Q7DLS1|PSB7B_ARATH4E-54Proteasome subunit beta type-7-B (Precursor)
trEMBLtr|A0A022QVQ7|A0A022QVQ7_ERYGU7E-54Proteasome subunit beta type {ECO:0000256|RuleBase:RU004203}
TAIR10AT5G40580.26E-4520S proteasome beta subunit PBB2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene106187154106188941-
GWHAAZE00000003mRNA106187154106188941-
GWHAAZE00000003exon106187154106187259-
GWHAAZE00000003exon106187869106187966-
GWHAAZE00000003exon106188060106188114-
GWHAAZE00000003exon106188190106188333-
GWHAAZE00000003exon106188401106188520-
GWHAAZE00000003exon106188847106188941-
GWHAAZE00000003CDS106188847106188941-
GWHAAZE00000003CDS106188401106188520-
GWHAAZE00000003CDS106188190106188333-
GWHAAZE00000003CDS106188060106188114-
GWHAAZE00000003CDS106187869106187966-
GWHAAZE00000003CDS106187154106187259-
Transcript Sequence

Network for GWHGAAZE013667

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02739PSMB7 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.658
SRR3591706second leaf1.387
SRR3591707mature leaf1.261
SRR3591708Shoot apex2.389
SRR3591709Stem2.033
SRR3591710White floral bud1.662
SRR3591711White flower2.092
SRR3591712Green floral bud1.134
SRR3591713Yellow flower1.592
SRP173429 SRR8316895Juvenile bud stage 0.543
SRR8316896Juvenile bud stage 0.664
SRR8316897Juvenile bud stage 0.497
SRR8316894Third green stage 0.324
SRR8316900Third green stage 0.704
SRR8316901Third green stage 0.908
SRR8316898Complete white stage 0.417
SRR8316899Complete white stage 0.948
SRR8316903Complete white stage 0.806
SRR8316902Silver flowering stage0.354
SRR8316904Silver flowering stage1.001
SRR8316905Silver flowering stage0.543
SRR8316906Gold flowering stage 0.542
SRR8316907Gold flowering stage 1.090
SRR8316908Gold flowering stage 0.786
SRP132670SRR6706286Control1.344
SRR6706287Light intensity 50%2.029
SRR6706288Light intensity 20%1.806
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.319
CNS0095593Slightly white alabastrum(diploid) 20.712
CNS0095594Slightly white alabastrum(diploid) 30.327
CNS0095595Whole white alabastrum(diploid) 20.262
CNS0095596Whole white alabastrum(diploid) 30.768
CNS0095597Whole white alabastrum(diploid) 40.326
CNS0095598Silvery flower (diploied) 10.359
CNS0095599Silvery flower (diploied) 21.107
CNS0095600Silvery flower (diploied) 30.646
CNS0095601Golden flower (diploid) 10.168
CNS0095602Golden flower (diploid) 20.475
CNS0095603Golden flower (diploid) 30.669
CNS0095604Slightly white alabastrum(tetraploid) 11.093
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.665
CNS0095607Whole white alabastrum(tetraploid) 10.335
CNS0095608Whole white alabastrum(tetraploid) 20.433
CNS0095609Whole white alabastrum(tetraploid) 30.271
CNS0095610Silvery flower (tetraploid) 10.733
CNS0095611Silvery flower (tetraploid) 20.523
CNS0095612Silvery flower (tetraploid) 30.597
CNS0095613Golden flower (tetraploid) 10.338
CNS0095614Golden flower (tetraploid) 20.899
CNS0095615Golden flower (tetraploid) 30.850
CRA001975CRR073297Stem 10.154
CRR073298Stem 20.199
CRR073299Stem 30.142
CRR073300Leaf 10.213
CRR073301Leaf 20.388
CRR073302Leaf 30.180
CRR073303Juvenile bud 10.174
CRR073304Juvenile bud 20.133
CRR073305Juvenile bud 30.046
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.040
CRR073309Second white 10.084
CRR073310Second white 20.143
CRR073311Second white 30.109
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.083
CRR073314Silver flowering 30.032
CRR073315Gold flowering 10.098
CRR073316Gold flowering 20.304
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.307
CRR073320Tawny withering 30.119