Gene detail

Detail information of GWHGAAZE013438

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007222565.1	3.4831E-152	hypothetical protein PRUPE_ppa008387mg [Prunus persica]
Swissprot	tr\|Q9CAA4\|BIM2_ARATH	2E-103	Transcription factor BIM2
trEMBL	tr\|M5XCV5\|M5XCV5_PRUPE	1E-152	Uncharacterized protein {ECO:0000313\|EMBL:EMJ23764.1}
TAIR10	AT1G69010.1	8E-83	BES1-interacting Myc-like protein 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	102672227	102677605	+
GWHAAZE00000003	mRNA	102672227	102677605	+
GWHAAZE00000003	exon	102672227	102672382	+
GWHAAZE00000003	exon	102672478	102672610	+
GWHAAZE00000003	exon	102674018	102674087	+
GWHAAZE00000003	exon	102674178	102674273	+
GWHAAZE00000003	exon	102675020	102675429	+
GWHAAZE00000003	exon	102676698	102676842	+
GWHAAZE00000003	exon	102677498	102677605	+
GWHAAZE00000003	five_prime_UTR	102672227	102672285	+
GWHAAZE00000003	CDS	102672286	102672382	+
GWHAAZE00000003	CDS	102672478	102672610	+
GWHAAZE00000003	CDS	102674018	102674087	+
GWHAAZE00000003	CDS	102674178	102674273	+
GWHAAZE00000003	CDS	102675020	102675429	+
GWHAAZE00000003	CDS	102676698	102676842	+
GWHAAZE00000003	CDS	102677498	102677605	+

Transcript Sequence
>GWHTAAZE013452 GGTTTTTTCAATCTCGTTGAGGAAATCTGCAATCATAAATTCAGTCGACAAAAAAGAGGATGAAATCGGCCAAAGGTCTTCATCAGGATGAGGAAGAAGACGAGTACGAGGAGTTCGGTTCCAAAAGAGATGCCCAACCCTCCAATACCAACAGAGATGGGAAGAACAATGATAAGGCGAGTGCAACAAGGTCAAAGCATTCAGTAACCGAGCAACGTCGAAGGAGCAAGATCAATGAGAGGCATGTATCAATCACCATCACTGCTATATTTGATTCTGTAGTTTTTGTATTTCAAATATTGAGAGATCTGATACCTAACAGTGATCAAAAGAGAGATACAGCATCATTCCTGTTGGAGGTGATTGAGTACGTTCAGTATTTACAAGAAAAAGTACAAAAGCATGAGGGATCATACCAAGGTTGGAGTCCAGAGCCCACAAAGTTGATGCCTTGGAGAAATAGTCACTGGAGGGTTCAGAGTTTTGTTGGTCATCCTCAAGCTGTAAAGAATGATCCTGGTCTAGCATCAACCTTTCCTGGACGGTTTGACGAGAACAATGTGATCACCCCCTCTATGCACACAAGTCCTCAGGATCCTGTTGAATCTGAGCCTAGCTCATGTAAATTGATGGATCAACAACCTGAACTAATAAATAAGGCTACCGTCATTCCCATGCCTTTACCAGTAAGCATGGGTGCTCCTCCTGTCCAAGGCAATGGTTTGTTTTCCCATCCTCTTCGGAGACCTGTTTCTGATACAACAGAGTCAGCTGATTGCTCCATCACTAGTGACACACTGAACCAGCAGGAGGACCTGACCATTGAAGGAGGCACAATTAACATTTCAAGTGTTTATTCTCAAGGGTTATTGAATACTCTGACGGGAGCACTTCAGAATGCGGGCGTGGATCTGTCTCAGGCCACCATCTCAGTGCAGGTTGATCTTGGGAAGCGAGCAAATAGAGGACTTACCTCTGGTACACCCATGGGCAAGGTAATAACCATTTATGATCATGAAATTCCCCATTCCAGCAATAATCAGCCTGTTGGCCATTTTCAGGATGCAAGCAATGGTGGCGGGGATGCGGATCAAGCTCAAAAGAGGATGAAGTTATGA

Network for GWHGAAZE013438

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046983	molecular_function	protein dimerization activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	39.385
	SRR3591706	second leaf	22.798
	SRR3591707	mature leaf	29.415
	SRR3591708	Shoot apex	33.581
	SRR3591709	Stem	44.955
	SRR3591710	White floral bud	39.796
	SRR3591711	White flower	53.487
	SRR3591712	Green floral bud	34.251
	SRR3591713	Yellow flower	70.755
SRP173429	SRR8316895	Juvenile bud stage	16.556
	SRR8316896	Juvenile bud stage	25.319
	SRR8316897	Juvenile bud stage	10.180
	SRR8316894	Third green stage	10.169
	SRR8316900	Third green stage	29.096
	SRR8316901	Third green stage	30.020
	SRR8316898	Complete white stage	19.478
	SRR8316899	Complete white stage	38.503
	SRR8316903	Complete white stage	28.114
	SRR8316902	Silver flowering stage	20.727
	SRR8316904	Silver flowering stage	29.836
	SRR8316905	Silver flowering stage	15.132
	SRR8316906	Gold flowering stage	55.041
	SRR8316907	Gold flowering stage	40.145
	SRR8316908	Gold flowering stage	48.156
SRP132670	SRR6706286	Control	30.253
	SRR6706287	Light intensity 50%	29.048
	SRR6706288	Light intensity 20%	29.257
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	20.877
	CNS0095593	Slightly white alabastrum(diploid) 2	18.385
	CNS0095594	Slightly white alabastrum(diploid) 3	22.550
	CNS0095595	Whole white alabastrum(diploid) 2	20.248
	CNS0095596	Whole white alabastrum(diploid) 3	23.401
	CNS0095597	Whole white alabastrum(diploid) 4	23.763
	CNS0095598	Silvery flower (diploied) 1	21.471
	CNS0095599	Silvery flower (diploied) 2	23.034
	CNS0095600	Silvery flower (diploied) 3	38.075
	CNS0095601	Golden flower (diploid) 1	25.547
	CNS0095602	Golden flower (diploid) 2	41.340
	CNS0095603	Golden flower (diploid) 3	40.196
	CNS0095604	Slightly white alabastrum(tetraploid) 1	18.757
	CNS0095605	Slightly white alabastrum(tetraploid) 2	14.612
	CNS0095606	Slightly white alabastrum(tetraploid) 3	22.728
	CNS0095607	Whole white alabastrum(tetraploid) 1	14.988
	CNS0095608	Whole white alabastrum(tetraploid) 2	17.501
	CNS0095609	Whole white alabastrum(tetraploid) 3	19.508
	CNS0095610	Silvery flower (tetraploid) 1	28.787
	CNS0095611	Silvery flower (tetraploid) 2	36.690
	CNS0095612	Silvery flower (tetraploid) 3	34.904
	CNS0095613	Golden flower (tetraploid) 1	38.331
	CNS0095614	Golden flower (tetraploid) 2	36.174
	CNS0095615	Golden flower (tetraploid) 3	65.172
CRA001975	CRR073297	Stem 1	22.238
	CRR073298	Stem 2	27.137
	CRR073299	Stem 3	25.774
	CRR073300	Leaf 1	32.809
	CRR073301	Leaf 2	27.897
	CRR073302	Leaf 3	30.379
	CRR073303	Juvenile bud 1	32.394
	CRR073304	Juvenile bud 2	25.265
	CRR073305	Juvenile bud 3	34.037
	CRR073306	Third green 1	40.292
	CRR073307	Third green 2	37.453
	CRR073308	Third green 3	34.447
	CRR073309	Second white 1	34.338
	CRR073310	Second white 2	34.188
	CRR073311	Second white 3	29.966
	CRR073312	Silver flowering 1	41.120
	CRR073313	Silver flowering 2	35.597
	CRR073314	Silver flowering 3	31.589
	CRR073315	Gold flowering 1	14.876
	CRR073316	Gold flowering 2	21.700
	CRR073317	Gold flowering 3	19.734
	CRR073318	Tawny withering 1	30.156
	CRR073319	Tawny withering 2	20.931
	CRR073320	Tawny withering 3	30.492