Detail information of GWHGAAZE013396


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010093397.12.0727E-110hypothetical protein L484_022960 [Morus notabilis]
Swissprottr|Q9S7Y1|BH030_ARATH8E-97Transcription factor bHLH30
trEMBLtr|W9R402|W9R402_9ROSA8E-111Uncharacterized protein {ECO:0000313|EMBL:EXB53991.1}
TAIR10AT1G68810.12E-60basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene102024264102026914-
GWHAAZE00000003mRNA102024264102026914-
GWHAAZE00000003exon102026621102026914-
GWHAAZE00000003exon102024264102024683-
GWHAAZE00000003CDS102026621102026914-
GWHAAZE00000003CDS102024264102024683-
Transcript Sequence

Network for GWHGAAZE013396

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH691151.30E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.992
SRR3591706second leaf11.137
SRR3591707mature leaf5.930
SRR3591708Shoot apex20.493
SRR3591709Stem18.163
SRR3591710White floral bud4.677
SRR3591711White flower3.793
SRR3591712Green floral bud6.924
SRR3591713Yellow flower1.687
SRP173429 SRR8316895Juvenile bud stage 3.709
SRR8316896Juvenile bud stage 4.712
SRR8316897Juvenile bud stage 2.091
SRR8316894Third green stage 1.647
SRR8316900Third green stage 4.627
SRR8316901Third green stage 5.029
SRR8316898Complete white stage 0.477
SRR8316899Complete white stage 12.613
SRR8316903Complete white stage 1.495
SRR8316902Silver flowering stage1.267
SRR8316904Silver flowering stage1.268
SRR8316905Silver flowering stage0.437
SRR8316906Gold flowering stage 1.407
SRR8316907Gold flowering stage 1.855
SRR8316908Gold flowering stage 2.218
SRP132670SRR6706286Control4.902
SRR6706287Light intensity 50%4.928
SRR6706288Light intensity 20%3.740
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.207
CNS0095593Slightly white alabastrum(diploid) 23.637
CNS0095594Slightly white alabastrum(diploid) 31.653
CNS0095595Whole white alabastrum(diploid) 21.568
CNS0095596Whole white alabastrum(diploid) 31.319
CNS0095597Whole white alabastrum(diploid) 41.715
CNS0095598Silvery flower (diploied) 11.768
CNS0095599Silvery flower (diploied) 21.713
CNS0095600Silvery flower (diploied) 32.294
CNS0095601Golden flower (diploid) 11.685
CNS0095602Golden flower (diploid) 23.107
CNS0095603Golden flower (diploid) 32.174
CNS0095604Slightly white alabastrum(tetraploid) 11.409
CNS0095605Slightly white alabastrum(tetraploid) 21.052
CNS0095606Slightly white alabastrum(tetraploid) 38.648
CNS0095607Whole white alabastrum(tetraploid) 10.914
CNS0095608Whole white alabastrum(tetraploid) 20.680
CNS0095609Whole white alabastrum(tetraploid) 32.981
CNS0095610Silvery flower (tetraploid) 12.068
CNS0095611Silvery flower (tetraploid) 22.556
CNS0095612Silvery flower (tetraploid) 31.154
CNS0095613Golden flower (tetraploid) 10.755
CNS0095614Golden flower (tetraploid) 20.543
CNS0095615Golden flower (tetraploid) 31.575
CRA001975CRR073297Stem 14.382
CRR073298Stem 26.624
CRR073299Stem 37.049
CRR073300Leaf 15.233
CRR073301Leaf 23.901
CRR073302Leaf 34.978
CRR073303Juvenile bud 15.149
CRR073304Juvenile bud 21.646
CRR073305Juvenile bud 35.650
CRR073306Third green 10.560
CRR073307Third green 21.379
CRR073308Third green 30.874
CRR073309Second white 10.349
CRR073310Second white 20.117
CRR073311Second white 30.071
CRR073312Silver flowering 10.196
CRR073313Silver flowering 20.352
CRR073314Silver flowering 30.414
CRR073315Gold flowering 11.028
CRR073316Gold flowering 21.888
CRR073317Gold flowering 31.316
CRR073318Tawny withering 110.330
CRR073319Tawny withering 26.930
CRR073320Tawny withering 314.580