Detail information of GWHGAAZE013333


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011094289.10PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Sesamum indicum]
Swissprottr|O82039|SPY_PETHY0Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
trEMBLtr|D7TJA8|D7TJA8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI30334.3}
TAIR10AT3G11540.10Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100943002100954608-
GWHAAZE00000003mRNA100943002100954608-
GWHAAZE00000003exon100954525100954608-
GWHAAZE00000003exon100953903100954013-
GWHAAZE00000003exon100953063100953182-
GWHAAZE00000003exon100950900100950964-
GWHAAZE00000003exon100946762100946960-
GWHAAZE00000003exon100946351100946545-
GWHAAZE00000003exon100945527100945621-
GWHAAZE00000003exon100945272100945407-
GWHAAZE00000003exon100944921100945138-
GWHAAZE00000003exon100944447100944574-
GWHAAZE00000003exon100943002100943432-
GWHAAZE00000003CDS100954525100954608-
GWHAAZE00000003CDS100953903100954013-
GWHAAZE00000003CDS100953063100953182-
GWHAAZE00000003CDS100950900100950964-
GWHAAZE00000003CDS100946762100946960-
GWHAAZE00000003CDS100946351100946545-
GWHAAZE00000003CDS100945527100945621-
GWHAAZE00000003CDS100945272100945407-
GWHAAZE00000003CDS100944921100945138-
GWHAAZE00000003CDS100944447100944574-
GWHAAZE00000003CDS100943002100943432-
Transcript Sequence

Network for GWHGAAZE013333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13844.7Glyco_transf_411403033.80E-25
PF13844.7Glyco_transf_413205002.40E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09667OGT Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.381
SRR3591706second leaf12.283
SRR3591707mature leaf15.626
SRR3591708Shoot apex21.588
SRR3591709Stem23.432
SRR3591710White floral bud22.224
SRR3591711White flower25.883
SRR3591712Green floral bud23.815
SRR3591713Yellow flower21.293
SRP173429 SRR8316895Juvenile bud stage 16.984
SRR8316896Juvenile bud stage 22.128
SRR8316897Juvenile bud stage 12.697
SRR8316894Third green stage 8.872
SRR8316900Third green stage 24.322
SRR8316901Third green stage 22.139
SRR8316898Complete white stage 8.237
SRR8316899Complete white stage 29.368
SRR8316903Complete white stage 18.211
SRR8316902Silver flowering stage9.673
SRR8316904Silver flowering stage13.602
SRR8316905Silver flowering stage5.493
SRR8316906Gold flowering stage 20.783
SRR8316907Gold flowering stage 18.289
SRR8316908Gold flowering stage 21.834
SRP132670SRR6706286Control12.209
SRR6706287Light intensity 50%12.102
SRR6706288Light intensity 20%13.317
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.166
CNS0095593Slightly white alabastrum(diploid) 214.831
CNS0095594Slightly white alabastrum(diploid) 310.711
CNS0095595Whole white alabastrum(diploid) 213.688
CNS0095596Whole white alabastrum(diploid) 310.345
CNS0095597Whole white alabastrum(diploid) 411.383
CNS0095598Silvery flower (diploied) 120.000
CNS0095599Silvery flower (diploied) 215.149
CNS0095600Silvery flower (diploied) 325.015
CNS0095601Golden flower (diploid) 115.638
CNS0095602Golden flower (diploid) 228.325
CNS0095603Golden flower (diploid) 325.604
CNS0095604Slightly white alabastrum(tetraploid) 114.382
CNS0095605Slightly white alabastrum(tetraploid) 212.138
CNS0095606Slightly white alabastrum(tetraploid) 323.273
CNS0095607Whole white alabastrum(tetraploid) 111.412
CNS0095608Whole white alabastrum(tetraploid) 29.729
CNS0095609Whole white alabastrum(tetraploid) 318.547
CNS0095610Silvery flower (tetraploid) 125.445
CNS0095611Silvery flower (tetraploid) 226.201
CNS0095612Silvery flower (tetraploid) 317.756
CNS0095613Golden flower (tetraploid) 111.160
CNS0095614Golden flower (tetraploid) 222.449
CNS0095615Golden flower (tetraploid) 322.954
CRA001975CRR073297Stem 119.264
CRR073298Stem 217.581
CRR073299Stem 312.974
CRR073300Leaf 118.879
CRR073301Leaf 214.872
CRR073302Leaf 314.157
CRR073303Juvenile bud 114.656
CRR073304Juvenile bud 29.480
CRR073305Juvenile bud 320.983
CRR073306Third green 14.729
CRR073307Third green 23.009
CRR073308Third green 35.166
CRR073309Second white 16.555
CRR073310Second white 24.628
CRR073311Second white 34.307
CRR073312Silver flowering 15.912
CRR073313Silver flowering 25.383
CRR073314Silver flowering 34.785
CRR073315Gold flowering 17.956
CRR073316Gold flowering 211.245
CRR073317Gold flowering 36.476
CRR073318Tawny withering 117.013
CRR073319Tawny withering 216.708
CRR073320Tawny withering 316.165