Detail information of GWHGAAZE013299


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010654038.10PREDICTED: serine/threonine-protein kinase CTR1 [Vitis vinifera]
Swissprottr|Q05609|CTR1_ARATH0Serine/threonine-protein kinase CTR1
trEMBLtr|F6HKH7|F6HKH7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB55399.1}
TAIR10AT5G03730.20Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100295951100317041-
GWHAAZE00000003mRNA100295951100317041-
GWHAAZE00000003exon100316739100317041-
GWHAAZE00000003exon100316451100316627-
GWHAAZE00000003exon100314076100314377-
GWHAAZE00000003exon100313572100313710-
GWHAAZE00000003exon100312967100313070-
GWHAAZE00000003exon100312439100312647-
GWHAAZE00000003exon100310301100310714-
GWHAAZE00000003exon100309852100309892-
GWHAAZE00000003exon100307631100307751-
GWHAAZE00000003exon100306833100306858-
GWHAAZE00000003exon100304633100304701-
GWHAAZE00000003exon100303971100304071-
GWHAAZE00000003exon100303778100303862-
GWHAAZE00000003exon100303562100303660-
GWHAAZE00000003exon100302402100302533-
GWHAAZE00000003exon100296695100296789-
GWHAAZE00000003exon100295951100296050-
GWHAAZE00000003CDS100316739100317041-
GWHAAZE00000003CDS100316451100316627-
GWHAAZE00000003CDS100314076100314377-
GWHAAZE00000003CDS100313572100313710-
GWHAAZE00000003CDS100312967100313070-
GWHAAZE00000003CDS100312439100312647-
GWHAAZE00000003CDS100310301100310714-
GWHAAZE00000003CDS100309852100309892-
GWHAAZE00000003CDS100307631100307751-
GWHAAZE00000003CDS100306833100306858-
GWHAAZE00000003CDS100304633100304701-
GWHAAZE00000003CDS100303971100304071-
GWHAAZE00000003CDS100303778100303862-
GWHAAZE00000003CDS100303562100303660-
GWHAAZE00000003CDS100302402100302533-
GWHAAZE00000003CDS100296695100296789-
GWHAAZE00000003CDS100295951100296050-
Transcript Sequence

Network for GWHGAAZE013299

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14381.7EDR11533566.90E-82
PF07714.18PK_Tyr_Ser-Thr6127302.00E-28
PF07714.18PK_Tyr_Ser-Thr7318213.70E-22
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL_CTR1-DRK-2

KEGG pathway

KO Enzyme pathway mapID
K14510CTR1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.282
SRR3591706second leaf9.258
SRR3591707mature leaf7.938
SRR3591708Shoot apex14.198
SRR3591709Stem19.561
SRR3591710White floral bud19.539
SRR3591711White flower24.832
SRR3591712Green floral bud20.128
SRR3591713Yellow flower17.999
SRP173429 SRR8316895Juvenile bud stage 9.125
SRR8316896Juvenile bud stage 11.622
SRR8316897Juvenile bud stage 6.502
SRR8316894Third green stage 5.667
SRR8316900Third green stage 13.075
SRR8316901Third green stage 14.511
SRR8316898Complete white stage 7.191
SRR8316899Complete white stage 20.683
SRR8316903Complete white stage 11.484
SRR8316902Silver flowering stage8.361
SRR8316904Silver flowering stage11.964
SRR8316905Silver flowering stage5.161
SRR8316906Gold flowering stage 18.690
SRR8316907Gold flowering stage 16.315
SRR8316908Gold flowering stage 23.490
SRP132670SRR6706286Control8.895
SRR6706287Light intensity 50%10.456
SRR6706288Light intensity 20%11.031
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.014
CNS0095593Slightly white alabastrum(diploid) 26.622
CNS0095594Slightly white alabastrum(diploid) 36.475
CNS0095595Whole white alabastrum(diploid) 26.248
CNS0095596Whole white alabastrum(diploid) 36.292
CNS0095597Whole white alabastrum(diploid) 45.942
CNS0095598Silvery flower (diploied) 19.807
CNS0095599Silvery flower (diploied) 26.445
CNS0095600Silvery flower (diploied) 319.387
CNS0095601Golden flower (diploid) 17.758
CNS0095602Golden flower (diploid) 217.662
CNS0095603Golden flower (diploid) 316.267
CNS0095604Slightly white alabastrum(tetraploid) 18.595
CNS0095605Slightly white alabastrum(tetraploid) 26.470
CNS0095606Slightly white alabastrum(tetraploid) 314.636
CNS0095607Whole white alabastrum(tetraploid) 16.682
CNS0095608Whole white alabastrum(tetraploid) 25.361
CNS0095609Whole white alabastrum(tetraploid) 311.787
CNS0095610Silvery flower (tetraploid) 117.892
CNS0095611Silvery flower (tetraploid) 216.418
CNS0095612Silvery flower (tetraploid) 317.699
CNS0095613Golden flower (tetraploid) 18.533
CNS0095614Golden flower (tetraploid) 215.958
CNS0095615Golden flower (tetraploid) 318.180
CRA001975CRR073297Stem 115.214
CRR073298Stem 214.341
CRR073299Stem 313.782
CRR073300Leaf 114.422
CRR073301Leaf 213.713
CRR073302Leaf 312.946
CRR073303Juvenile bud 113.357
CRR073304Juvenile bud 28.751
CRR073305Juvenile bud 319.494
CRR073306Third green 18.900
CRR073307Third green 27.257
CRR073308Third green 38.416
CRR073309Second white 113.411
CRR073310Second white 211.702
CRR073311Second white 319.064
CRR073312Silver flowering 116.188
CRR073313Silver flowering 219.302
CRR073314Silver flowering 316.670
CRR073315Gold flowering 16.427
CRR073316Gold flowering 29.952
CRR073317Gold flowering 37.578
CRR073318Tawny withering 111.230
CRR073319Tawny withering 210.766
CRR073320Tawny withering 314.436