Detail information of GWHGAAZE013266


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007027731.10Tubulin/FtsZ family protein isoform 1 [Theobroma cacao]
Swissprottr|O82533|FTZ21_ARATH0Cell division protein FtsZ homolog 2-1, chloroplastic (Precursor)
trEMBLtr|A0A061EUB7|A0A061EUB7_THECC0Tubulin/FtsZ family protein isoform 1 {ECO:0000313|EMBL:EOY08233.1}
TAIR10AT2G36250.24E-167Tubulin/FtsZ family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9974409499754979-
GWHAAZE00000003mRNA9974409499754979-
GWHAAZE00000003exon9974409499744405-
GWHAAZE00000003exon9974789999747964-
GWHAAZE00000003exon9974872099748812-
GWHAAZE00000003exon9974940499749486-
GWHAAZE00000003exon9975121099751300-
GWHAAZE00000003exon9975224399752542-
GWHAAZE00000003exon9975435099754979-
GWHAAZE00000003CDS9975435099754979-
GWHAAZE00000003CDS9975224399752542-
GWHAAZE00000003CDS9975121099751300-
GWHAAZE00000003CDS9974940499749486-
GWHAAZE00000003CDS9974872099748812-
GWHAAZE00000003CDS9974789999747964-
GWHAAZE00000003CDS9974429599744405-
GWHAAZE00000003three_prime_UTR9974409499744294-
Transcript Sequence

Network for GWHGAAZE013266

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00091.26Tubulin1192805.00E-39
PF12327.9FtsZ_C3304103.00E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03531ftsZ Cell cycle - Caulobacter map04112

Gene Ontology

GO term OntologyName
GO:0005525molecular_functionGTP binding
GO:0003924molecular_functionGTPase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.945
SRR3591706second leaf69.937
SRR3591707mature leaf67.248
SRR3591708Shoot apex45.617
SRR3591709Stem30.030
SRR3591710White floral bud30.609
SRR3591711White flower29.558
SRR3591712Green floral bud46.273
SRR3591713Yellow flower24.060
SRP173429 SRR8316895Juvenile bud stage 31.592
SRR8316896Juvenile bud stage 36.875
SRR8316897Juvenile bud stage 20.261
SRR8316894Third green stage 16.834
SRR8316900Third green stage 56.483
SRR8316901Third green stage 47.824
SRR8316898Complete white stage 12.933
SRR8316899Complete white stage 68.237
SRR8316903Complete white stage 18.766
SRR8316902Silver flowering stage7.305
SRR8316904Silver flowering stage9.952
SRR8316905Silver flowering stage4.483
SRR8316906Gold flowering stage 15.601
SRR8316907Gold flowering stage 15.974
SRR8316908Gold flowering stage 17.932
SRP132670SRR6706286Control45.896
SRR6706287Light intensity 50%50.728
SRR6706288Light intensity 20%60.505
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.816
CNS0095593Slightly white alabastrum(diploid) 225.465
CNS0095594Slightly white alabastrum(diploid) 321.700
CNS0095595Whole white alabastrum(diploid) 226.590
CNS0095596Whole white alabastrum(diploid) 324.386
CNS0095597Whole white alabastrum(diploid) 425.916
CNS0095598Silvery flower (diploied) 136.410
CNS0095599Silvery flower (diploied) 234.008
CNS0095600Silvery flower (diploied) 328.132
CNS0095601Golden flower (diploid) 130.067
CNS0095602Golden flower (diploid) 226.705
CNS0095603Golden flower (diploid) 326.424
CNS0095604Slightly white alabastrum(tetraploid) 133.770
CNS0095605Slightly white alabastrum(tetraploid) 230.061
CNS0095606Slightly white alabastrum(tetraploid) 362.221
CNS0095607Whole white alabastrum(tetraploid) 119.907
CNS0095608Whole white alabastrum(tetraploid) 222.954
CNS0095609Whole white alabastrum(tetraploid) 354.114
CNS0095610Silvery flower (tetraploid) 130.736
CNS0095611Silvery flower (tetraploid) 244.162
CNS0095612Silvery flower (tetraploid) 332.007
CNS0095613Golden flower (tetraploid) 111.491
CNS0095614Golden flower (tetraploid) 221.924
CNS0095615Golden flower (tetraploid) 36.642
CRA001975CRR073297Stem 153.416
CRR073298Stem 249.102
CRR073299Stem 356.696
CRR073300Leaf 154.391
CRR073301Leaf 245.327
CRR073302Leaf 350.027
CRR073303Juvenile bud 155.832
CRR073304Juvenile bud 244.908
CRR073305Juvenile bud 344.019
CRR073306Third green 111.223
CRR073307Third green 24.617
CRR073308Third green 38.271
CRR073309Second white 111.689
CRR073310Second white 29.872
CRR073311Second white 36.668
CRR073312Silver flowering 16.977
CRR073313Silver flowering 28.581
CRR073314Silver flowering 37.525
CRR073315Gold flowering 188.181
CRR073316Gold flowering 2130.961
CRR073317Gold flowering 389.092
CRR073318Tawny withering 130.794
CRR073319Tawny withering 228.665
CRR073320Tawny withering 338.304