Gene detail

Detail information of GWHGAAZE013159

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011094751.1	3.0338E-160	PREDICTED: adenylate kinase-like [Sesamum indicum]
Swissprot	tr\|Q9ZUU1\|KAD1_ARATH	3E-144	Adenylate kinase 1, chloroplastic (Precursor)
trEMBL	tr\|A0A022RET8\|A0A022RET8_ERYGU	4E-156	Uncharacterized protein {ECO:0000313\|EMBL:EYU38504.1}
TAIR10	AT2G37250.1	3E-105	adenosine kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	97744460	97748292	+
GWHAAZE00000003	mRNA	97744460	97748292	+
GWHAAZE00000003	exon	97744460	97744756	+
GWHAAZE00000003	exon	97745798	97745938	+
GWHAAZE00000003	exon	97746689	97746961	+
GWHAAZE00000003	exon	97748149	97748292	+
GWHAAZE00000003	CDS	97744460	97744756	+
GWHAAZE00000003	CDS	97745798	97745938	+
GWHAAZE00000003	CDS	97746689	97746961	+
GWHAAZE00000003	CDS	97748149	97748292	+

Transcript Sequence
>GWHTAAZE013173 ATGGCGGCCATTAACCGCCTGTTGAGGAACTCACTCTCATCCTCCTCCCCAATCACTTTCATAAGGAGATCTCTATCTACTTCATCTACTTCTTCCATATCTGGATCAAACGATACTACTCGCGTGGTGGTGGATGATCCCAAGGGCAGAAACGTCCAGTGGGTTTTCCTCGGCTGCCCCGGCGTCGGAAAGGGAACATATGCTAGTCGCCTATCTAACCTACTCGGCGTTCCTCACATCGCCACCGGAGATCTCGTCCGCGAAGAACTCTCTTCCAAAGGCCCTCTCTCCCATCAGCTTGCAGAGATTGTTAATCAGGGGAAGTTGGTTTCTGATGAGATTATAATAAGCTTACTGTCCAAGAGACTTGAGACTGGAGAATCTAAAGGTGAATCGGGGTTCATTCTCGATGGTTTTCCTAGAACAATTAGACAAGCAGAAATATTGGATGATGTGACGGACATTGACTTGGTGATTAATCTCAAGCTCCGAGAAGACGTATTGCTTGAGAAATGCCTTGGGCGAAGGCTTTGCAGCCAATGTGGTAAAAACTTCAATGTAGCATCCATTAATGTCAAGGCCGAGAATGGGAGTCCTGGAATGAGCATGGCTCCTCTTCTTCCTCCTCCCCATTGTGCCTCAAAGCTCATCACTCGGTCCGATGATACTGAAGATGTTGTAAAAGAGAGGCTTCGTATATACAATGAGAAGAGTCAACCCGTGGAAGGATACTACAGGAGTCGAGGAAAATTAATGGAGTTTGATCTGCCAGGAGGGATCCCAGAAACTTGGCCCAAGTTGCTTGAAGCTCTTAATCTCGACGAACAAGAGGACAAGCGGTCTGCTGCTGCATAA

Network for GWHGAAZE013159

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00406.23	ADK	57	249	1.30E-39

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00939	adk, AK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0006139	biological_process	nucleobase-containing compound metabolic process
GO:0005524	molecular_function	ATP binding
GO:0019205	molecular_function	nucleobase-containing compound kinase activity
GO:0004017	molecular_function	adenylate kinase activity
GO:0016776	molecular_function	phosphotransferase activity, phosphate group as acceptor

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	85.727
	SRR3591706	second leaf	73.135
	SRR3591707	mature leaf	46.724
	SRR3591708	Shoot apex	48.170
	SRR3591709	Stem	53.462
	SRR3591710	White floral bud	107.016
	SRR3591711	White flower	92.036
	SRR3591712	Green floral bud	102.290
	SRR3591713	Yellow flower	84.960
SRP173429	SRR8316895	Juvenile bud stage	25.137
	SRR8316896	Juvenile bud stage	54.083
	SRR8316897	Juvenile bud stage	29.422
	SRR8316894	Third green stage	30.142
	SRR8316900	Third green stage	122.884
	SRR8316901	Third green stage	114.911
	SRR8316898	Complete white stage	93.262
	SRR8316899	Complete white stage	77.051
	SRR8316903	Complete white stage	128.905
	SRR8316902	Silver flowering stage	104.584
	SRR8316904	Silver flowering stage	116.999
	SRR8316905	Silver flowering stage	66.089
	SRR8316906	Gold flowering stage	164.187
	SRR8316907	Gold flowering stage	202.712
	SRR8316908	Gold flowering stage	220.232
SRP132670	SRR6706286	Control	68.609
	SRR6706287	Light intensity 50%	80.981
	SRR6706288	Light intensity 20%	69.933
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	45.833
	CNS0095593	Slightly white alabastrum(diploid) 2	34.178
	CNS0095594	Slightly white alabastrum(diploid) 3	61.085
	CNS0095595	Whole white alabastrum(diploid) 2	76.697
	CNS0095596	Whole white alabastrum(diploid) 3	88.027
	CNS0095597	Whole white alabastrum(diploid) 4	82.553
	CNS0095598	Silvery flower (diploied) 1	39.775
	CNS0095599	Silvery flower (diploied) 2	38.517
	CNS0095600	Silvery flower (diploied) 3	105.097
	CNS0095601	Golden flower (diploid) 1	29.163
	CNS0095602	Golden flower (diploid) 2	71.843
	CNS0095603	Golden flower (diploid) 3	69.027
	CNS0095604	Slightly white alabastrum(tetraploid) 1	76.706
	CNS0095605	Slightly white alabastrum(tetraploid) 2	71.072
	CNS0095606	Slightly white alabastrum(tetraploid) 3	21.473
	CNS0095607	Whole white alabastrum(tetraploid) 1	118.733
	CNS0095608	Whole white alabastrum(tetraploid) 2	131.526
	CNS0095609	Whole white alabastrum(tetraploid) 3	112.557
	CNS0095610	Silvery flower (tetraploid) 1	137.447
	CNS0095611	Silvery flower (tetraploid) 2	112.428
	CNS0095612	Silvery flower (tetraploid) 3	202.181
	CNS0095613	Golden flower (tetraploid) 1	78.246
	CNS0095614	Golden flower (tetraploid) 2	114.540
	CNS0095615	Golden flower (tetraploid) 3	105.485
CRA001975	CRR073297	Stem 1	32.966
	CRR073298	Stem 2	32.774
	CRR073299	Stem 3	39.518
	CRR073300	Leaf 1	71.370
	CRR073301	Leaf 2	64.111
	CRR073302	Leaf 3	55.059
	CRR073303	Juvenile bud 1	69.389
	CRR073304	Juvenile bud 2	140.686
	CRR073305	Juvenile bud 3	42.626
	CRR073306	Third green 1	257.037
	CRR073307	Third green 2	197.196
	CRR073308	Third green 3	198.185
	CRR073309	Second white 1	283.450
	CRR073310	Second white 2	238.478
	CRR073311	Second white 3	214.341
	CRR073312	Silver flowering 1	223.804
	CRR073313	Silver flowering 2	218.161
	CRR073314	Silver flowering 3	228.801
	CRR073315	Gold flowering 1	54.718
	CRR073316	Gold flowering 2	70.389
	CRR073317	Gold flowering 3	56.926
	CRR073318	Tawny withering 1	112.033
	CRR073319	Tawny withering 2	109.358
	CRR073320	Tawny withering 3	92.207