Detail information of GWHGAAZE013134


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277802.10PREDICTED: UDP-glucuronic acid decarboxylase 1 [Vitis vinifera]
Swissprottr|Q8VZC0|UXS1_ARATH0UDP-glucuronic acid decarboxylase 1
trEMBLtr|F6HQX8|F6HQX8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57027.1}
TAIR10AT3G53520.19E-163UDP-glucuronic acid decarboxylase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9738232297386809-
GWHAAZE00000003mRNA9738232297386809-
GWHAAZE00000003exon9738232297382531-
GWHAAZE00000003exon9738318297383274-
GWHAAZE00000003exon9738464797384721-
GWHAAZE00000003exon9738495297385035-
GWHAAZE00000003exon9738537397385518-
GWHAAZE00000003exon9738563597385779-
GWHAAZE00000003exon9738616297386809-
GWHAAZE00000003CDS9738616297386809-
GWHAAZE00000003CDS9738563597385779-
GWHAAZE00000003CDS9738537397385518-
GWHAAZE00000003CDS9738495297385035-
GWHAAZE00000003CDS9738464797384721-
GWHAAZE00000003CDS9738318297383274-
GWHAAZE00000003CDS9738232297382531-
Transcript Sequence

Network for GWHGAAZE013134

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.6GDP_Man_Dehyd1374483.10E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08678UXS1, uxs Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.859
SRR3591706second leaf18.949
SRR3591707mature leaf34.799
SRR3591708Shoot apex18.858
SRR3591709Stem22.300
SRR3591710White floral bud23.697
SRR3591711White flower30.783
SRR3591712Green floral bud21.617
SRR3591713Yellow flower29.625
SRP173429 SRR8316895Juvenile bud stage 12.176
SRR8316896Juvenile bud stage 20.442
SRR8316897Juvenile bud stage 10.702
SRR8316894Third green stage 6.250
SRR8316900Third green stage 16.657
SRR8316901Third green stage 17.040
SRR8316898Complete white stage 4.865
SRR8316899Complete white stage 18.977
SRR8316903Complete white stage 11.249
SRR8316902Silver flowering stage7.308
SRR8316904Silver flowering stage8.066
SRR8316905Silver flowering stage4.177
SRR8316906Gold flowering stage 15.557
SRR8316907Gold flowering stage 14.338
SRR8316908Gold flowering stage 23.533
SRP132670SRR6706286Control13.003
SRR6706287Light intensity 50%12.767
SRR6706288Light intensity 20%13.291
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.311
CNS0095593Slightly white alabastrum(diploid) 212.966
CNS0095594Slightly white alabastrum(diploid) 318.320
CNS0095595Whole white alabastrum(diploid) 212.667
CNS0095596Whole white alabastrum(diploid) 311.313
CNS0095597Whole white alabastrum(diploid) 414.741
CNS0095598Silvery flower (diploied) 123.669
CNS0095599Silvery flower (diploied) 218.040
CNS0095600Silvery flower (diploied) 326.279
CNS0095601Golden flower (diploid) 121.945
CNS0095602Golden flower (diploid) 222.930
CNS0095603Golden flower (diploid) 324.742
CNS0095604Slightly white alabastrum(tetraploid) 17.728
CNS0095605Slightly white alabastrum(tetraploid) 27.777
CNS0095606Slightly white alabastrum(tetraploid) 38.408
CNS0095607Whole white alabastrum(tetraploid) 17.874
CNS0095608Whole white alabastrum(tetraploid) 26.204
CNS0095609Whole white alabastrum(tetraploid) 36.135
CNS0095610Silvery flower (tetraploid) 118.531
CNS0095611Silvery flower (tetraploid) 217.513
CNS0095612Silvery flower (tetraploid) 38.649
CNS0095613Golden flower (tetraploid) 17.815
CNS0095614Golden flower (tetraploid) 212.185
CNS0095615Golden flower (tetraploid) 37.528
CRA001975CRR073297Stem 122.115
CRR073298Stem 221.013
CRR073299Stem 316.519
CRR073300Leaf 118.703
CRR073301Leaf 220.558
CRR073302Leaf 310.193
CRR073303Juvenile bud 113.777
CRR073304Juvenile bud 215.966
CRR073305Juvenile bud 319.024
CRR073306Third green 113.152
CRR073307Third green 210.182
CRR073308Third green 310.476
CRR073309Second white 116.338
CRR073310Second white 218.582
CRR073311Second white 314.814
CRR073312Silver flowering 118.736
CRR073313Silver flowering 223.614
CRR073314Silver flowering 318.479
CRR073315Gold flowering 120.315
CRR073316Gold flowering 222.436
CRR073317Gold flowering 310.199
CRR073318Tawny withering 119.410
CRR073319Tawny withering 219.522
CRR073320Tawny withering 323.551