Detail information of GWHGAAZE013114


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP44981.10hypothetical protein JCGZ_01481 [Jatropha curcas]
Swissprottr|P27322|HSP72_SOLLC0Heat shock cognate 70 kDa protein 2
trEMBLtr|A0A067L941|A0A067L941_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP44981.1}
TAIR10AT5G02500.10heat shock cognate protein 70-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9699266096996249-
GWHAAZE00000003mRNA9699266096996249-
GWHAAZE00000003exon9699266096993091-
GWHAAZE00000003exon9699317596993261-
GWHAAZE00000003exon9699354196994667-
GWHAAZE00000003exon9699603696996249-
GWHAAZE00000003CDS9699603696996249-
GWHAAZE00000003CDS9699354196994667-
GWHAAZE00000003CDS9699317596993261-
GWHAAZE00000003CDS9699266096993091-
Transcript Sequence

Network for GWHGAAZE013114

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP7094773.90E-220
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf668.613
SRR3591706second leaf524.811
SRR3591707mature leaf874.015
SRR3591708Shoot apex591.057
SRR3591709Stem679.340
SRR3591710White floral bud798.577
SRR3591711White flower786.545
SRR3591712Green floral bud955.909
SRR3591713Yellow flower514.877
SRP173429 SRR8316895Juvenile bud stage 584.215
SRR8316896Juvenile bud stage 843.481
SRR8316897Juvenile bud stage 404.144
SRR8316894Third green stage 274.289
SRR8316900Third green stage 685.684
SRR8316901Third green stage 825.403
SRR8316898Complete white stage 317.112
SRR8316899Complete white stage 798.764
SRR8316903Complete white stage 458.702
SRR8316902Silver flowering stage614.010
SRR8316904Silver flowering stage639.934
SRR8316905Silver flowering stage503.552
SRR8316906Gold flowering stage 1024.137
SRR8316907Gold flowering stage 1044.526
SRR8316908Gold flowering stage 983.164
SRP132670SRR6706286Control623.643
SRR6706287Light intensity 50%665.463
SRR6706288Light intensity 20%655.501
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1423.145
CNS0095593Slightly white alabastrum(diploid) 2441.331
CNS0095594Slightly white alabastrum(diploid) 3387.032
CNS0095595Whole white alabastrum(diploid) 2336.357
CNS0095596Whole white alabastrum(diploid) 3323.302
CNS0095597Whole white alabastrum(diploid) 4285.516
CNS0095598Silvery flower (diploied) 1218.799
CNS0095599Silvery flower (diploied) 2398.532
CNS0095600Silvery flower (diploied) 3691.924
CNS0095601Golden flower (diploid) 1411.276
CNS0095602Golden flower (diploid) 2709.790
CNS0095603Golden flower (diploid) 3689.170
CNS0095604Slightly white alabastrum(tetraploid) 1542.379
CNS0095605Slightly white alabastrum(tetraploid) 2445.826
CNS0095606Slightly white alabastrum(tetraploid) 31016.281
CNS0095607Whole white alabastrum(tetraploid) 1294.941
CNS0095608Whole white alabastrum(tetraploid) 2276.419
CNS0095609Whole white alabastrum(tetraploid) 3700.009
CNS0095610Silvery flower (tetraploid) 1532.020
CNS0095611Silvery flower (tetraploid) 2568.075
CNS0095612Silvery flower (tetraploid) 3799.092
CNS0095613Golden flower (tetraploid) 1625.210
CNS0095614Golden flower (tetraploid) 2703.880
CNS0095615Golden flower (tetraploid) 3798.791
CRA001975CRR073297Stem 1264.947
CRR073298Stem 2239.357
CRR073299Stem 3247.224
CRR073300Leaf 1254.126
CRR073301Leaf 2296.724
CRR073302Leaf 3232.380
CRR073303Juvenile bud 1243.956
CRR073304Juvenile bud 2297.577
CRR073305Juvenile bud 3251.261
CRR073306Third green 11664.273
CRR073307Third green 2975.586
CRR073308Third green 31057.315
CRR073309Second white 11160.259
CRR073310Second white 2898.637
CRR073311Second white 31017.427
CRR073312Silver flowering 1932.428
CRR073313Silver flowering 2962.425
CRR073314Silver flowering 3792.916
CRR073315Gold flowering 1347.878
CRR073316Gold flowering 2358.977
CRR073317Gold flowering 3330.718
CRR073318Tawny withering 1565.322
CRR073319Tawny withering 2630.267
CRR073320Tawny withering 3586.382