Gene detail

Detail information of GWHGAAZE012955

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007205214.1	0	hypothetical protein PRUPE_ppa005902mg [Prunus persica]
Swissprot	tr\|Q9LZW4\|CIPKE_ARATH	0	CBL-interacting serine/threonine-protein kinase 14
trEMBL	tr\|M5WAX9\|M5WAX9_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ06413.1}
TAIR10	AT5G01820.1	4E-143	serine/threonine protein kinase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	94227788	94229035	+
GWHAAZE00000003	mRNA	94227788	94229035	+
GWHAAZE00000003	exon	94227788	94229035	+
GWHAAZE00000003	CDS	94227788	94229035	+

Transcript Sequence
>GWHTAAZE012969 ATGAACCTGTTCGGCAAGTATGAGCTCGGAAAACTCCTCGGATACGGCGCCTTCGCGAAGGTGTACCACGCAAGGAACATACGAACGGGACAAAGCGTTGCAATCAAAGCAGTGAGCAAGCAAAAGGTCCTCAAAGGAGGTCTCACGGCGCACGTTAAGCGGGAGATATCTATCATGCGCCGGCTTCACCACCCTCACATCGTGCGCCTCCTCGAGGTAATGGCCACCAAGACCAAGGTCTACTTCATCCTCGAGTTTGCCAAAGGCGGCGAACTATTCGCCAAAATCGCCAGAGGACGCTTCAGCGAAGATCTCAGCCGCAAATACTTCCGCCAGTTAATATCAGCCGTCGGATATTGCCACTCACGTGGCATCTTCCACCGCGATTTAAAGCCGGAAAATCTCCTCCTCGACGATAATTGGGACCTAAAAGTCACCGATTTCGGACTCAGTGCCGTCACGGAACAGGTCCGACCCGACGGACTTCTCCATACTCTTTGCGGCACCCCTGCTTACGTGGCACCGGAAGTCCTAGCGAAGAAAGGATACGATGGTGCTAAGGTGGATATCTGGTCATGCGGCATCATCCTATACGTGTTAACCGCCGGTTATTTGCCGTTCAATGATACGAATCTGATGGTTATGTATCGAAAAATCTACAAAGGCGAATTTCGTTGCCCTAAATGGATGTCTCCAGATCTAAAAAACATTTTATCTCGCCTCCTTGATACGAATCCCGACTCAAGGATCACCGTTGATCAGATCATCAACGATCCTTGGTTCGATAAAGGTTATAGAGGAATTAAAATTAAGTTTCATGAGGAAAATTTCGATTTCGAGCTTAAAAATCACAATAATGGCAAGGAATTGAATGCTTTTGATATAATCTCGTTCTCCTCCGGTGTCGATCTGTCCGGTTTGTTCAGTGTGGCTGATTCTACGGTTAATCTGGAGCGGTTCGTATCGGCGGAATCGCCGGAGAGAATAATCGGAGTAATGGAGGAGGTTGCCAAGGAGGAGAATATGACGGTGATGAGAGAGAAAGATTGGGGCGTGAAGGTTGAGGGGCAAAATGGTAATTTTAGCGTTAGCGCGTTGTTTCACCGGTTAACGGAGGACCTGTTTGTTGTGGAAATTACGAGAAGAGAGAGTAGGGTTGGATCCAGTCATGAGATGTGGACAGATAAGTTGAGACCGAGGCTTACTGATTTAATTTATCAACCGGCTACGCAGGTTGCCGGTATCTGA

Network for GWHGAAZE012955

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	7	261	7.20E-73
PF03822.15	NAF	289	345	5.30E-20

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007165	biological_process	signal transduction
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	123.028
	SRR3591706	second leaf	103.996
	SRR3591707	mature leaf	76.725
	SRR3591708	Shoot apex	89.654
	SRR3591709	Stem	69.122
	SRR3591710	White floral bud	73.357
	SRR3591711	White flower	55.349
	SRR3591712	Green floral bud	73.366
	SRR3591713	Yellow flower	36.835
SRP173429	SRR8316895	Juvenile bud stage	32.506
	SRR8316896	Juvenile bud stage	25.428
	SRR8316897	Juvenile bud stage	31.574
	SRR8316894	Third green stage	15.601
	SRR8316900	Third green stage	37.382
	SRR8316901	Third green stage	45.418
	SRR8316898	Complete white stage	18.025
	SRR8316899	Complete white stage	124.810
	SRR8316903	Complete white stage	25.817
	SRR8316902	Silver flowering stage	8.919
	SRR8316904	Silver flowering stage	6.234
	SRR8316905	Silver flowering stage	6.511
	SRR8316906	Gold flowering stage	26.866
	SRR8316907	Gold flowering stage	23.664
	SRR8316908	Gold flowering stage	17.766
SRP132670	SRR6706286	Control	54.614
	SRR6706287	Light intensity 50%	49.956
	SRR6706288	Light intensity 20%	49.591
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	40.016
	CNS0095593	Slightly white alabastrum(diploid) 2	34.816
	CNS0095594	Slightly white alabastrum(diploid) 3	39.767
	CNS0095595	Whole white alabastrum(diploid) 2	29.928
	CNS0095596	Whole white alabastrum(diploid) 3	23.129
	CNS0095597	Whole white alabastrum(diploid) 4	27.161
	CNS0095598	Silvery flower (diploied) 1	58.197
	CNS0095599	Silvery flower (diploied) 2	58.521
	CNS0095600	Silvery flower (diploied) 3	43.349
	CNS0095601	Golden flower (diploid) 1	54.280
	CNS0095602	Golden flower (diploid) 2	55.272
	CNS0095603	Golden flower (diploid) 3	56.641
	CNS0095604	Slightly white alabastrum(tetraploid) 1	20.482
	CNS0095605	Slightly white alabastrum(tetraploid) 2	21.551
	CNS0095606	Slightly white alabastrum(tetraploid) 3	42.933
	CNS0095607	Whole white alabastrum(tetraploid) 1	13.883
	CNS0095608	Whole white alabastrum(tetraploid) 2	15.321
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.718
	CNS0095610	Silvery flower (tetraploid) 1	13.833
	CNS0095611	Silvery flower (tetraploid) 2	14.491
	CNS0095612	Silvery flower (tetraploid) 3	33.311
	CNS0095613	Golden flower (tetraploid) 1	6.694
	CNS0095614	Golden flower (tetraploid) 2	11.644
	CNS0095615	Golden flower (tetraploid) 3	7.672
CRA001975	CRR073297	Stem 1	74.752
	CRR073298	Stem 2	78.219
	CRR073299	Stem 3	95.029
	CRR073300	Leaf 1	97.682
	CRR073301	Leaf 2	119.222
	CRR073302	Leaf 3	92.907
	CRR073303	Juvenile bud 1	112.010
	CRR073304	Juvenile bud 2	148.045
	CRR073305	Juvenile bud 3	214.408
	CRR073306	Third green 1	193.364
	CRR073307	Third green 2	153.656
	CRR073308	Third green 3	159.436
	CRR073309	Second white 1	121.250
	CRR073310	Second white 2	101.610
	CRR073311	Second white 3	96.894
	CRR073312	Silver flowering 1	149.981
	CRR073313	Silver flowering 2	170.899
	CRR073314	Silver flowering 3	109.712
	CRR073315	Gold flowering 1	111.804
	CRR073316	Gold flowering 2	120.977
	CRR073317	Gold flowering 3	107.723
	CRR073318	Tawny withering 1	48.960
	CRR073319	Tawny withering 2	61.571
	CRR073320	Tawny withering 3	46.455