Detail information of GWHGAAZE012830


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006365673.10PREDICTED: dnaJ protein homolog isoform X2 [Solanum tuberosum]
Swissprottr|Q04960|DNJH_CUCSA0DnaJ protein homolog (Precursor)
trEMBLtr|M0ZPC7|M0ZPC7_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400005019}
TAIR10AT5G22060.17E-158DNAJ homologue 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9227927092283302-
GWHAAZE00000003mRNA9227927092283302-
GWHAAZE00000003exon9227927092279589-
GWHAAZE00000003exon9228011892280316-
GWHAAZE00000003exon9228070792280983-
GWHAAZE00000003exon9228141992281560-
GWHAAZE00000003exon9228165592281823-
GWHAAZE00000003exon9228315392283302-
GWHAAZE00000003CDS9228315392283302-
GWHAAZE00000003CDS9228165592281823-
GWHAAZE00000003CDS9228141992281560-
GWHAAZE00000003CDS9228070792280983-
GWHAAZE00000003CDS9228011892280316-
GWHAAZE00000003CDS9227927092279589-
Transcript Sequence

Network for GWHGAAZE012830

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00226.32DnaJ13712.80E-23
PF01556.19DnaJ_C1233443.00E-40
PF00684.20DnaJ_CXXCXGXG1492152.90E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09503DNAJA2 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0006457biological_processprotein folding
GO:0009408biological_processresponse to heat
GO:0051082molecular_functionunfolded protein binding
GO:0031072molecular_functionheat shock protein binding
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf307.409
SRR3591706second leaf203.125
SRR3591707mature leaf402.039
SRR3591708Shoot apex246.615
SRR3591709Stem391.382
SRR3591710White floral bud515.732
SRR3591711White flower477.607
SRR3591712Green floral bud411.248
SRR3591713Yellow flower488.648
SRP173429 SRR8316895Juvenile bud stage 365.436
SRR8316896Juvenile bud stage 609.066
SRR8316897Juvenile bud stage 289.013
SRR8316894Third green stage 165.463
SRR8316900Third green stage 645.338
SRR8316901Third green stage 720.825
SRR8316898Complete white stage 354.726
SRR8316899Complete white stage 1041.481
SRR8316903Complete white stage 441.826
SRR8316902Silver flowering stage429.141
SRR8316904Silver flowering stage452.111
SRR8316905Silver flowering stage322.285
SRR8316906Gold flowering stage 1071.481
SRR8316907Gold flowering stage 973.048
SRR8316908Gold flowering stage 820.435
SRP132670SRR6706286Control524.378
SRR6706287Light intensity 50%514.008
SRR6706288Light intensity 20%516.328
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1281.814
CNS0095593Slightly white alabastrum(diploid) 2298.854
CNS0095594Slightly white alabastrum(diploid) 3281.603
CNS0095595Whole white alabastrum(diploid) 2260.176
CNS0095596Whole white alabastrum(diploid) 3237.422
CNS0095597Whole white alabastrum(diploid) 4258.515
CNS0095598Silvery flower (diploied) 1312.326
CNS0095599Silvery flower (diploied) 2477.848
CNS0095600Silvery flower (diploied) 3758.518
CNS0095601Golden flower (diploid) 1622.620
CNS0095602Golden flower (diploid) 2765.385
CNS0095603Golden flower (diploid) 3758.865
CNS0095604Slightly white alabastrum(tetraploid) 1342.659
CNS0095605Slightly white alabastrum(tetraploid) 2288.061
CNS0095606Slightly white alabastrum(tetraploid) 3626.071
CNS0095607Whole white alabastrum(tetraploid) 1231.684
CNS0095608Whole white alabastrum(tetraploid) 2211.172
CNS0095609Whole white alabastrum(tetraploid) 3461.021
CNS0095610Silvery flower (tetraploid) 1513.725
CNS0095611Silvery flower (tetraploid) 2699.563
CNS0095612Silvery flower (tetraploid) 3643.376
CNS0095613Golden flower (tetraploid) 1537.296
CNS0095614Golden flower (tetraploid) 2579.123
CNS0095615Golden flower (tetraploid) 3701.432
CRA001975CRR073297Stem 1192.060
CRR073298Stem 2192.691
CRR073299Stem 3228.357
CRR073300Leaf 1233.634
CRR073301Leaf 2234.060
CRR073302Leaf 3271.310
CRR073303Juvenile bud 1244.710
CRR073304Juvenile bud 2283.069
CRR073305Juvenile bud 3279.433
CRR073306Third green 1786.816
CRR073307Third green 2560.033
CRR073308Third green 3541.359
CRR073309Second white 1782.945
CRR073310Second white 2647.892
CRR073311Second white 3594.781
CRR073312Silver flowering 1609.606
CRR073313Silver flowering 2653.330
CRR073314Silver flowering 3480.083
CRR073315Gold flowering 1165.972
CRR073316Gold flowering 2160.198
CRR073317Gold flowering 3219.695
CRR073318Tawny withering 1218.136
CRR073319Tawny withering 2192.228
CRR073320Tawny withering 3217.526