Gene detail

Detail information of GWHGAAZE012777

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_009607294.1	PREDICTED: ABC transporter C family member 10-like [Nicotiana tomentosiformis]
Swissprot	tr\|Q9LYS2\|AB10C_ARATH	ABC transporter C family member 10
trEMBL	tr\|A0A061G1Z4\|A0A061G1Z4_THECC	Multidrug resistance-associated protein 14 isoform 1 {ECO:0000313\|EMBL:EOY23418.1}
TAIR10	AT3G59140.1	multidrug resistance-associated protein 14

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	91435392	91444421	+
GWHAAZE00000003	mRNA	91435392	91444421	+
GWHAAZE00000003	exon	91435392	91437449	+
GWHAAZE00000003	exon	91437879	91438199	+
GWHAAZE00000003	exon	91438288	91438374	+
GWHAAZE00000003	exon	91439314	91439901	+
GWHAAZE00000003	exon	91439984	91440148	+
GWHAAZE00000003	exon	91440447	91440741	+
GWHAAZE00000003	exon	91441277	91441491	+
GWHAAZE00000003	exon	91441928	91442204	+
GWHAAZE00000003	exon	91442918	91443022	+
GWHAAZE00000003	exon	91443124	91443363	+
GWHAAZE00000003	exon	91443875	91444421	+
GWHAAZE00000003	CDS	91435392	91437449	+
GWHAAZE00000003	CDS	91437879	91438199	+
GWHAAZE00000003	CDS	91438288	91438374	+
GWHAAZE00000003	CDS	91439314	91439901	+
GWHAAZE00000003	CDS	91439984	91440148	+
GWHAAZE00000003	CDS	91440447	91440741	+
GWHAAZE00000003	CDS	91441277	91441491	+
GWHAAZE00000003	CDS	91441928	91442204	+
GWHAAZE00000003	CDS	91442918	91443022	+
GWHAAZE00000003	CDS	91443124	91443363	+
GWHAAZE00000003	CDS	91443875	91443987	+
GWHAAZE00000003	three_prime_UTR	91443988	91444421	+

Transcript Sequence
>GWHTAAZE012791 ATGGAGAACCTGTGGACTGTATTTTGTGGGGAATCTGATTGTTCAGATGGCAATGGGAAGGCTTGCGGTGCTAAATTGGTGTTTTTGACTCATCCTTCTTCATGTATCAATCACGCATTAATCATTTGCTTTGACATATTGCTCTTAGCCACGTTCTTAATCAACATGTTTTACAAGCATTCGCCTAAACCCAAACGTGTTCCTTTTCGCTTTCGTGGCATTTCATCTTTGCAGTTGATTTCTTCAATTTTCAATGGTTTCTTGGGATTGATGTACTTGTGTTTGGGCATCTGGATGTTAGAAGAGAAGTTGAGAAAAAATCATTTGATTTTACCTCTCCATTGGTGGTTACTATTTTTATTTCATGGACTAATATGGTTATTAGTGTGCTTAACTGTGAGCCTTCGAGGAAATCTTTTTCGAAAAGCCCCAATGCGGCTTTTGTCAATTCTTTCCTTTTTGTTTGCTGGAGTTTCTTGTGGTTTATCTCTTGTCGGTGTCATTTTTAACAAAGAGACTTCACTTAGGGTAGCCTTAGATGTCTTATCTTTTGTAGGAGCAAGTTTATTGTTGCTATGCATTTATAAAGGTTACAAACATGAAGAAAGTGATGAAATAGCCAATGGGAATGATCTTTATACCCCACTTAATGGTGAGGCCAATGGCAGAAGAAAGACCAATTCTGTTGGCTCAGTCACTCAATTTGCCGATGCTGGATTTTTCAGTAAGATGTCATTTTGGTGGTTAAATTCGTTGATGACTAAGGGTCGAGAAAAATCACTAGAGGATGAAGATATACCCAAGTTGCGTAAAGCGGACCGAGCAGAGACATGCTACACAGATTTCGTTGATCAACTCAACAAACAGAAACAAATTGATCCATCATCTCAACCGTCAATTTTGAGGACAATAGTATTATGCCACTGGAAAGATATTTTCATCTCTGGGTTCTTTGCGCTTTTGAAGATAATCACGATATCCGCTGGTCCTCTTCTTCTTAATGCTTTCATCAAGGTCGCTGAAGGTAACGAAAGTTTCAAAAATGAGGGCTATGTATTAGCTATATTGCTGTTCTTTGCAAAAAGTCTAGAGTCCCTATCCCAAAGGCAATGGTACTTTCAGACTAGAATTATTGGTCTAAAAGTGAGGTCCTTGCTGACGGCTGCCATTTATAAGAAGCAACTAAGACTATCTAATGCTGCAAAGACAATGCACTCTGCTGGTGAGATAATGAACTATGTTACAGTTGATGCTTATCGGATTGGAGAGTTCCCTTTCTGGTTTCATCAATTGTGGACTACTAGCCTTCAGCTCTGTTTTGCACTAGTAATTCTTTTCAATGCAGTGGGACTTGCTACTATTGCATCATTGGTGGTCATAATTCTCACCGTACTTTGTAATACTCCACTAGCTAAATTGCAGCATAGGTTCCAGTCTAAGCTTATGATGGCACAAGATTCGAGGCTCAAGGCTAGTTCAGAGGCTCTTATAACCATGAAGGTGTTGAAACTATATGCATGGGAAAACCATTTCAAGAACGTCATCGAAAACTTGAGAGCGACCGAAGAAAAGTGGTTATCAGCTGTTCAATTGCGTAAAGCATATAATAGCTTTCTTTTTTGGTCATCCCCTGTATTGGTCTCTACTGCTACCTTCGGGGCTTGCTATTTCCTCGGGGTCCCACTGTATGCTAGCAACGTTTTCACCTTTGTAGCAACACTGCGTCTCGTTCAGGACCCGGTTAGATCTATCCCCGAAGTTATTGGGGTGGTCATTCAAGCCAAAGTTTCATTTGCTAGAATTTTAAATTTTCTTGAGGCGCCCGAGCTTGAAAATGCAAATGTACGGCGGATATTGAAGAGGGACAACACAGATTGCAACATTTTTATCAAGTCAGCTAACCTTTCATGGGAAGAGAATGAGGTGAAACCTACACTTAGAGATGTTAACCTAGAGATCAAAATGGGTGAAAAGATTGCTATTTGTGGAGAGGTCGGTTCAGGCAAGTCAACCCTTCTTGCGGCAATTCTTGGCGAGGTTCCGAATATCCAGGGAACTATACAAGTATATGGGAGTATTGCCTATGTTTCTCAGTCAGCATGGATTCAAACAGGAACTATACGAGAGAATATTCTATTTGGATCTGCTTTGGATAGCCAAAGATACAAAGAAACACTTGAGAGGTGTTCGTTGGTGAAGGACCTCGAGCTGCTACCCTATGGGGATCTAACTGAAATAGGGGAAAGAGGAGTTAATCTTAGTGGCGGTCAGAAGCAAAGGATTCAACTTGCTCGAGCACTGTATCAAGATGCTGATATTTATCTCTTGGATGATCCATTTAGCGCTGTTGATGCACATACTGCTACCAGCCTATTTAATGAATATGTAATGGGAGCTCTTGCTGGGAAGACGGTCTTACTTGTGACGCATCAAGTTGATTTCCTTCCCGCATTTGATTCCGTTCTGTTGATGTCAGACGGGGAAATCCTTCACGCTGCTCCTTACCATCAATTGCTTGCCTCAAGCCAAGAATTTCGAGACCTAGTCAATGCACATAAAGAGACCGCTGGTTCTGAAAGCGTCACAGTATCTACTTCTCCCCTGAGGCTCGAAACTTCTACAAGAGATATTAAAAAGACTTACGTTGAGGATACATCTAAAGGATCTAAAGGTGATCAGTTGATTAAGCAAGAAGAGAAGGAAATTGGGGACACGGGTTTTAAGCCTTATGTACAATATCTAAGTCAGAACAAAGGCTACTTGTACTTCTCTTTGGCTAGTCTTTGTCACCTTACATTTGTAGCCGGTCAGATATCACAAAACTCTTGGATGGCCGCAAATGTAGATAATCCCAATGTCAGCACGCTAAGATTGATCTTAGTTTACCTCGTGATTGGATTTGTATCAACGTCATTTCTTTTGGGTAGATCACTTTTTACGGTTGTTTTGGGTATTCAATCATCAAAATCTATGTTTTCTCAGCTATTAAAGTCTCTTTTCCGTGCACCCATGTCTTTTTATGACTCTACGCCTTTGGGAAGGATACTAAGTCGGGTCTCAGTTGATTTGAGTATTGTTGATCTTGACATTCCATTTAACTTGATTTTTGCTGTTGGGGCTACCTCAAATGCCTATGCTAATCTCGGAGTGCTAGCTGTTGTTACCTGGCAAGTCTTGTTTGTCTCAGTACCAATGGTTTATCTGGCAATTCGCCTACAGAGATACTACTTTGCATCTGCAAAAGAATTTATGAGGATCAATGGCACAACAAAATCTTTGGTAGCAAATCATCTTGCCGAATCTGTAGCCGGATCAATGACAATAAGAGCTTTCAAGGAGGAAGACCGGTTCTTTGCAAAGAACCTTGACCTTATTGATATAAATGCCAGTCCGTTCTTCCACAATTTTTCGGCGAATGAGTGGTTGATCCAACGGCTTGAAATACTTAGTGCAACTGTTCTATCGTCCTCTGCGCTATGCATGGTTTTGCTCCCTACTGGAACTTTCAGCTCTGGATTCATTGGAATGGCATTGTCCTATGGCCTCTCACTAAACATGTCACTTGTTTTTTCCATCCAAAATCAGTGCACTTTGGCAAATTATATTATTTCTGTGGAAAGGCTTAACCAGTACATGCACATACCAAGTGAAGCTCCCGAGGTGATAGAAGAGAACCGTCCCCCCGTCAATTGGCCGGATGTGGGTAAAGTTGATATTCAAGATTTGCAGATCAAATATAGACCCAACGCACCGCTTGTTCTTCGTGGGATCAGTTGTACATTTGAAGGGGGGCACAAGATTGGGATTGTTGGTCGAACTGGTAGTGGAAAGACTACTCTAATAGGTGCTTTATTTCGTCTCGTTGAGCCAGCAGGAGGGAAGATTGTAGTAGATGGAATTGACATCTCTAAAATTGGACTTCATGATTTAAGGTCACGTTTTGGGATTATACCACAAGATCCAACTCTTTTCAACGGAACTGTTAGATACAATTTGGATCCTTTATTCTTTCCAATAACTAATTACAGTAAGTACCTCTTTCTTAAGGTTCTTGGGAAGTGTCAGCTTAGAGATGCTGTGCAGGAGAAAGAAAATGGGCTAGACTCTTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAACGGCAATTGTTTTGTTTGGGCCGAGCTCTGTTGAGGAGAAGCAAGATATTGGTGCTTGATGAAGCAACTGCATCTGTTGACAATGCTACTGACTTGATTTTGCAGAAAACTATTAGGACCGAATTTGCTGATTGTACAGTCATCACAGTGGCCCACAGAATACCTACTGTCATGGATTGCACTACGGTTCTCGCCATTAGCGACGGAAAACTGGTAGAGTACGATGAACCAATGAACTTAATGAAGCGAGAAGGCTCACTATTCGGGCAGCTAGTAAAAGAGTACTGGTCACATTATCACTCTGCAGAATCACATTGAAGCGAATCATAATGCCTTATAATTCCCATCTTAGTTTGAATTTTCGCTATTGGGTTTTGAACCTCATATCGTACACTCGCGATCACTAATTGGTCCGGAAAAAAAGAGGCTTGCTGTAAATAAATTAGCTCGGTGAACCCTTTTGGGGCGGTGTCGGTCCGGACCAGAAAGTGGGAGCAGAAGTTTGGAAGGAGAATGTATTTAACTATTTATAATGCAAGTCGGTGATTTATGGGCGTGATCGGATGGTAAAATGGTAGAATTTGGCCCCTTTAGAATGTTTTGTAATGTTTAACCCACCATTTTATTGTAAAGCCTCAATTGCAATGTGTGATCTTTTTAATTGAAGAGAACTTGTTGTAATGTGGATTTTTGTTGTGTGTGATGACATTTCTTTGTCTAGTTAATTTCTAAAATTATTTCCAGGTTCAAGA

Network for GWHGAAZE012777

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00664.24	ABC_membrane	312	569	1.40E-20
PF00005.28	ABC_tran	646	780	9.10E-24
PF00664.24	ABC_membrane	922	1181	6.50E-25
PF00005.28	ABC_tran	1254	1406	1.90E-27

Protein Sequence

>GWHPAAZE012784
MENLWTVFCGESDCSDGNGKACGAKLVFLTHPSSCINHALIICFDILLLATFLINMFYKHSPKPKRVPFRFRGISSLQLISSIFNGFLGLMYLCLGIWMLEEKLRKNHLILPLHWWLLFLFHGLIWLLVCLTVSLRGNLFRKAPMRLLSILSFLFAGVSCGLSLVGVIFNKETSLRVALDVLSFVGASLLLLCIYKGYKHEESDEIANGNDLYTPLNGEANGRRKTNSVGSVTQFADAGFFSKMSFWWLNSLMTKGREKSLEDEDIPKLRKADRAETCYTDFVDQLNKQKQIDPSSQPSILRTIVLCHWKDIFISGFFALLKIITISAGPLLLNAFIKVAEGNESFKNEGYVLAILLFFAKSLESLSQRQWYFQTRIIGLKVRSLLTAAIYKKQLRLSNAAKTMHSAGEIMNYVTVDAYRIGEFPFWFHQLWTTSLQLCFALVILFNAVGLATIASLVVIILTVLCNTPLAKLQHRFQSKLMMAQDSRLKASSEALITMKVLKLYAWENHFKNVIENLRATEEKWLSAVQLRKAYNSFLFWSSPVLVSTATFGACYFLGVPLYASNVFTFVATLRLVQDPVRSIPEVIGVVIQAKVSFARILNFLEAPELENANVRRILKRDNTDCNIFIKSANLSWEENEVKPTLRDVNLEIKMGEKIAICGEVGSGKSTLLAAILGEVPNIQGTIQVYGSIAYVSQSAWIQTGTIRENILFGSALDSQRYKETLERCSLVKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTATSLFNEYVMGALAGKTVLLVTHQVDFLPAFDSVLLMSDGEILHAAPYHQLLASSQEFRDLVNAHKETAGSESVTVSTSPLRLETSTRDIKKTYVEDTSKGSKGDQLIKQEEKEIGDTGFKPYVQYLSQNKGYLYFSLASLCHLTFVAGQISQNSWMAANVDNPNVSTLRLILVYLVIGFVSTSFLLGRSLFTVVLGIQSSKSMFSQLLKSLFRAPMSFYDSTPLGRILSRVSVDLSIVDLDIPFNLIFAVGATSNAYANLGVLAVVTWQVLFVSVPMVYLAIRLQRYYFASAKEFMRINGTTKSLVANHLAESVAGSMTIRAFKEEDRFFAKNLDLIDINASPFFHNFSANEWLIQRLEILSATVLSSSALCMVLLPTGTFSSGFIGMALSYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAPEVIEENRPPVNWPDVGKVDIQDLQIKYRPNAPLVLRGISCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGKIVVDGIDISKIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLFFPITNYSKYLFLKVLGKCQLRDAVQEKENGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSKILVLDEATASVDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTTVLAISDGKLVEYDEPMNLMKREGSLFGQLVKEYWSHYHSAESH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05666	ABCC2	ABC transporters	map02010
K05666	ABCC2	Bile secretion	map04976

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0016021	cellular_component	integral component of membrane
GO:0005524	molecular_function	ATP binding
GO:0016887	molecular_function	ATPase activity
GO:0042626	molecular_function	ATPase-coupled transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	8.052
	SRR3591706	second leaf	20.493
	SRR3591707	mature leaf	26.039
	SRR3591708	Shoot apex	10.534
	SRR3591709	Stem	17.275
	SRR3591710	White floral bud	3.937
	SRR3591711	White flower	7.384
	SRR3591712	Green floral bud	4.169
	SRR3591713	Yellow flower	6.679
SRP173429	SRR8316895	Juvenile bud stage	4.860
	SRR8316896	Juvenile bud stage	8.221
	SRR8316897	Juvenile bud stage	2.105
	SRR8316894	Third green stage	2.480
	SRR8316900	Third green stage	5.836
	SRR8316901	Third green stage	6.973
	SRR8316898	Complete white stage	2.794
	SRR8316899	Complete white stage	4.109
	SRR8316903	Complete white stage	6.685
	SRR8316902	Silver flowering stage	18.814
	SRR8316904	Silver flowering stage	27.340
	SRR8316905	Silver flowering stage	12.529
	SRR8316906	Gold flowering stage	34.679
	SRR8316907	Gold flowering stage	20.857
	SRR8316908	Gold flowering stage	28.365
SRP132670	SRR6706286	Control	5.218
	SRR6706287	Light intensity 50%	4.471
	SRR6706288	Light intensity 20%	4.394
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.333
	CNS0095593	Slightly white alabastrum(diploid) 2	12.582
	CNS0095594	Slightly white alabastrum(diploid) 3	13.944
	CNS0095595	Whole white alabastrum(diploid) 2	14.510
	CNS0095596	Whole white alabastrum(diploid) 3	6.829
	CNS0095597	Whole white alabastrum(diploid) 4	15.559
	CNS0095598	Silvery flower (diploied) 1	12.725
	CNS0095599	Silvery flower (diploied) 2	15.773
	CNS0095600	Silvery flower (diploied) 3	13.926
	CNS0095601	Golden flower (diploid) 1	14.903
	CNS0095602	Golden flower (diploid) 2	19.791
	CNS0095603	Golden flower (diploid) 3	19.584
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.248
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.412
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.197
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.567
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.498
	CNS0095609	Whole white alabastrum(tetraploid) 3	5.617
	CNS0095610	Silvery flower (tetraploid) 1	12.115
	CNS0095611	Silvery flower (tetraploid) 2	6.337
	CNS0095612	Silvery flower (tetraploid) 3	3.483
	CNS0095613	Golden flower (tetraploid) 1	9.630
	CNS0095614	Golden flower (tetraploid) 2	15.902
	CNS0095615	Golden flower (tetraploid) 3	11.129
CRA001975	CRR073297	Stem 1	7.678
	CRR073298	Stem 2	6.353
	CRR073299	Stem 3	5.248
	CRR073300	Leaf 1	6.820
	CRR073301	Leaf 2	5.337
	CRR073302	Leaf 3	2.837
	CRR073303	Juvenile bud 1	2.998
	CRR073304	Juvenile bud 2	4.760
	CRR073305	Juvenile bud 3	3.634
	CRR073306	Third green 1	1.668
	CRR073307	Third green 2	1.922
	CRR073308	Third green 3	1.535
	CRR073309	Second white 1	1.538
	CRR073310	Second white 2	2.418
	CRR073311	Second white 3	1.521
	CRR073312	Silver flowering 1	1.851
	CRR073313	Silver flowering 2	3.373
	CRR073314	Silver flowering 3	3.979
	CRR073315	Gold flowering 1	6.937
	CRR073316	Gold flowering 2	15.971
	CRR073317	Gold flowering 3	7.475
	CRR073318	Tawny withering 1	3.147
	CRR073319	Tawny withering 2	3.808
	CRR073320	Tawny withering 3	1.835