Detail information of GWHGAAZE012771


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008234798.11.34647E-82PREDICTED: ABC transporter C family member 10-like [Prunus mume]
Swissprottr|Q9LYS2|AB10C_ARATH3E-75ABC transporter C family member 10
trEMBLtr|M1AIG2|M1AIG2_SOLTU3E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400023488}
TAIR10AT3G59140.14E-66multidrug resistance-associated protein 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9128356791284447-
GWHAAZE00000003mRNA9128356791284447-
GWHAAZE00000003exon9128421491284447-
GWHAAZE00000003exon9128356791283821-
GWHAAZE00000003CDS9128421491284447-
GWHAAZE00000003CDS9128356791283821-
Transcript Sequence

Network for GWHGAAZE012771

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.28ABC_tran981583.60E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05666ABCC2 ABC transporters map02010
Bile secretionmap04976

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding
GO:0016887molecular_functionATPase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.021
SRR3591706second leaf1.522
SRR3591707mature leaf3.083
SRR3591708Shoot apex7.082
SRR3591709Stem5.018
SRR3591710White floral bud1.603
SRR3591711White flower2.609
SRR3591712Green floral bud0.847
SRR3591713Yellow flower1.989
SRP173429 SRR8316895Juvenile bud stage 1.624
SRR8316896Juvenile bud stage 1.817
SRR8316897Juvenile bud stage 0.433
SRR8316894Third green stage 0.994
SRR8316900Third green stage 1.796
SRR8316901Third green stage 1.161
SRR8316898Complete white stage 0.978
SRR8316899Complete white stage 2.176
SRR8316903Complete white stage 1.391
SRR8316902Silver flowering stage0.289
SRR8316904Silver flowering stage0.902
SRR8316905Silver flowering stage0.309
SRR8316906Gold flowering stage 1.672
SRR8316907Gold flowering stage 1.612
SRR8316908Gold flowering stage 2.430
SRP132670SRR6706286Control0.835
SRR6706287Light intensity 50%1.599
SRR6706288Light intensity 20%1.348
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.273
CNS0095593Slightly white alabastrum(diploid) 22.913
CNS0095594Slightly white alabastrum(diploid) 32.211
CNS0095595Whole white alabastrum(diploid) 21.169
CNS0095596Whole white alabastrum(diploid) 31.068
CNS0095597Whole white alabastrum(diploid) 41.469
CNS0095598Silvery flower (diploied) 11.438
CNS0095599Silvery flower (diploied) 23.122
CNS0095600Silvery flower (diploied) 31.152
CNS0095601Golden flower (diploid) 13.410
CNS0095602Golden flower (diploid) 20.465
CNS0095603Golden flower (diploid) 31.133
CNS0095604Slightly white alabastrum(tetraploid) 12.697
CNS0095605Slightly white alabastrum(tetraploid) 22.066
CNS0095606Slightly white alabastrum(tetraploid) 32.936
CNS0095607Whole white alabastrum(tetraploid) 11.795
CNS0095608Whole white alabastrum(tetraploid) 20.758
CNS0095609Whole white alabastrum(tetraploid) 31.807
CNS0095610Silvery flower (tetraploid) 13.184
CNS0095611Silvery flower (tetraploid) 21.845
CNS0095612Silvery flower (tetraploid) 33.346
CNS0095613Golden flower (tetraploid) 11.779
CNS0095614Golden flower (tetraploid) 21.765
CNS0095615Golden flower (tetraploid) 31.667
CRA001975CRR073297Stem 10.919
CRR073298Stem 20.768
CRR073299Stem 30.086
CRR073300Leaf 11.145
CRR073301Leaf 22.626
CRR073302Leaf 30.661
CRR073303Juvenile bud 10.141
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.268
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.002
CRR073309Second white 10.000
CRR073310Second white 20.370
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.035
CRR073316Gold flowering 20.107
CRR073317Gold flowering 30.651
CRR073318Tawny withering 11.294
CRR073319Tawny withering 21.495
CRR073320Tawny withering 30.852