Detail information of GWHGAAZE012770


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK41433.12.22014E-40unknown [Lotus japonicus]
Swissprottr|Q9LYS2|AB10C_ARATH8E-39ABC transporter C family member 10
trEMBLtr|I3SME1|I3SME1_LOTJA8E-41Uncharacterized protein {ECO:0000313|EMBL:AFK41433.1}
TAIR10AT3G59140.16E-34multidrug resistance-associated protein 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9128168791283386-
GWHAAZE00000003mRNA9128168791283386-
GWHAAZE00000003exon9128333891283386-
GWHAAZE00000003exon9128300591283244-
GWHAAZE00000003exon9128168791281869-
GWHAAZE00000003five_prime_UTR9128333891283386-
GWHAAZE00000003five_prime_UTR9128321991283244-
GWHAAZE00000003CDS9128300591283218-
GWHAAZE00000003CDS9128186291281869-
GWHAAZE00000003three_prime_UTR9128168791281861-
Transcript Sequence

Network for GWHGAAZE012770

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05666ABCC2 ABC transporters map02010
Bile secretionmap04976

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.778
SRR3591706second leaf5.305
SRR3591707mature leaf4.742
SRR3591708Shoot apex10.002
SRR3591709Stem8.830
SRR3591710White floral bud4.643
SRR3591711White flower6.203
SRR3591712Green floral bud1.026
SRR3591713Yellow flower5.363
SRP173429 SRR8316895Juvenile bud stage 3.417
SRR8316896Juvenile bud stage 5.878
SRR8316897Juvenile bud stage 0.518
SRR8316894Third green stage 1.485
SRR8316900Third green stage 2.899
SRR8316901Third green stage 1.979
SRR8316898Complete white stage 2.181
SRR8316899Complete white stage 3.172
SRR8316903Complete white stage 3.167
SRR8316902Silver flowering stage1.016
SRR8316904Silver flowering stage1.042
SRR8316905Silver flowering stage0.929
SRR8316906Gold flowering stage 3.224
SRR8316907Gold flowering stage 1.670
SRR8316908Gold flowering stage 1.737
SRP132670SRR6706286Control2.690
SRR6706287Light intensity 50%1.985
SRR6706288Light intensity 20%2.773
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.088
CNS0095593Slightly white alabastrum(diploid) 26.952
CNS0095594Slightly white alabastrum(diploid) 33.711
CNS0095595Whole white alabastrum(diploid) 25.178
CNS0095596Whole white alabastrum(diploid) 31.639
CNS0095597Whole white alabastrum(diploid) 43.355
CNS0095598Silvery flower (diploied) 16.878
CNS0095599Silvery flower (diploied) 25.254
CNS0095600Silvery flower (diploied) 32.454
CNS0095601Golden flower (diploid) 15.966
CNS0095602Golden flower (diploid) 21.145
CNS0095603Golden flower (diploid) 31.981
CNS0095604Slightly white alabastrum(tetraploid) 13.659
CNS0095605Slightly white alabastrum(tetraploid) 24.613
CNS0095606Slightly white alabastrum(tetraploid) 35.687
CNS0095607Whole white alabastrum(tetraploid) 15.123
CNS0095608Whole white alabastrum(tetraploid) 24.068
CNS0095609Whole white alabastrum(tetraploid) 32.033
CNS0095610Silvery flower (tetraploid) 15.511
CNS0095611Silvery flower (tetraploid) 22.880
CNS0095612Silvery flower (tetraploid) 35.365
CNS0095613Golden flower (tetraploid) 13.640
CNS0095614Golden flower (tetraploid) 22.655
CNS0095615Golden flower (tetraploid) 32.566
CRA001975CRR073297Stem 11.928
CRR073298Stem 21.628
CRR073299Stem 30.687
CRR073300Leaf 12.690
CRR073301Leaf 24.152
CRR073302Leaf 30.517
CRR073303Juvenile bud 11.183
CRR073304Juvenile bud 20.168
CRR073305Juvenile bud 30.928
CRR073306Third green 10.311
CRR073307Third green 20.562
CRR073308Third green 30.238
CRR073309Second white 10.822
CRR073310Second white 20.000
CRR073311Second white 30.148
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.436
CRR073316Gold flowering 21.654
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.649
CRR073319Tawny withering 22.423
CRR073320Tawny withering 34.441