Detail information of GWHGAAZE012665


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003634163.11.9484E-100PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Vitis vinifera]
Swissprottr|Q94JX9|NACA2_ARATH1E-85Nascent polypeptide-associated complex subunit alpha-like protein 2
trEMBLtr|E0CVD7|E0CVD7_VITVI7E-101Putative uncharacterized protein {ECO:0000313|EMBL:CBI23098.3}
TAIR10AT3G49470.16E-46nascent polypeptide-associated complex subunit alpha-like protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8933951289342033-
GWHAAZE00000003mRNA8933951289342033-
GWHAAZE00000003exon8934188189342033-
GWHAAZE00000003exon8934167489341770-
GWHAAZE00000003exon8934037389340500-
GWHAAZE00000003exon8933951289339862-
GWHAAZE00000003five_prime_UTR8934192989342033-
GWHAAZE00000003CDS8934188189341928-
GWHAAZE00000003CDS8934167489341770-
GWHAAZE00000003CDS8934037389340500-
GWHAAZE00000003CDS8933951289339862-
Transcript Sequence

Network for GWHGAAZE012665

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01849.19NAC631183.10E-22
PF19026.1HYPK_UBA1682067.50E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03626EGD2, NACA Parathyroid hormone synthesis, secretion and action map04928

Gene Ontology

GO term OntologyName
GO:0005854cellular_componentnascent polypeptide-associated complex

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf134.874
SRR3591706second leaf123.952
SRR3591707mature leaf74.621
SRR3591708Shoot apex185.004
SRR3591709Stem65.493
SRR3591710White floral bud19.187
SRR3591711White flower22.584
SRR3591712Green floral bud55.896
SRR3591713Yellow flower4.064
SRP173429 SRR8316895Juvenile bud stage 85.009
SRR8316896Juvenile bud stage 128.559
SRR8316897Juvenile bud stage 55.262
SRR8316894Third green stage 39.039
SRR8316900Third green stage 93.480
SRR8316901Third green stage 95.640
SRR8316898Complete white stage 6.054
SRR8316899Complete white stage 38.363
SRR8316903Complete white stage 9.237
SRR8316902Silver flowering stage1.642
SRR8316904Silver flowering stage2.484
SRR8316905Silver flowering stage1.229
SRR8316906Gold flowering stage 2.030
SRR8316907Gold flowering stage 3.596
SRR8316908Gold flowering stage 3.273
SRP132670SRR6706286Control119.142
SRR6706287Light intensity 50%116.940
SRR6706288Light intensity 20%115.112
CNP0000432CNS0095592Slightly white alabastrum(diploid) 182.250
CNS0095593Slightly white alabastrum(diploid) 274.995
CNS0095594Slightly white alabastrum(diploid) 398.699
CNS0095595Whole white alabastrum(diploid) 267.893
CNS0095596Whole white alabastrum(diploid) 388.822
CNS0095597Whole white alabastrum(diploid) 452.146
CNS0095598Silvery flower (diploied) 168.950
CNS0095599Silvery flower (diploied) 261.484
CNS0095600Silvery flower (diploied) 316.530
CNS0095601Golden flower (diploid) 156.649
CNS0095602Golden flower (diploid) 230.282
CNS0095603Golden flower (diploid) 328.424
CNS0095604Slightly white alabastrum(tetraploid) 1100.582
CNS0095605Slightly white alabastrum(tetraploid) 2104.368
CNS0095606Slightly white alabastrum(tetraploid) 373.694
CNS0095607Whole white alabastrum(tetraploid) 172.067
CNS0095608Whole white alabastrum(tetraploid) 246.667
CNS0095609Whole white alabastrum(tetraploid) 379.426
CNS0095610Silvery flower (tetraploid) 19.536
CNS0095611Silvery flower (tetraploid) 214.842
CNS0095612Silvery flower (tetraploid) 37.187
CNS0095613Golden flower (tetraploid) 12.682
CNS0095614Golden flower (tetraploid) 26.563
CNS0095615Golden flower (tetraploid) 31.513
CRA001975CRR073297Stem 1122.694
CRR073298Stem 2120.254
CRR073299Stem 3145.128
CRR073300Leaf 168.115
CRR073301Leaf 287.126
CRR073302Leaf 398.219
CRR073303Juvenile bud 168.288
CRR073304Juvenile bud 234.428
CRR073305Juvenile bud 363.900
CRR073306Third green 13.997
CRR073307Third green 25.720
CRR073308Third green 34.945
CRR073309Second white 11.810
CRR073310Second white 20.906
CRR073311Second white 30.501
CRR073312Silver flowering 10.902
CRR073313Silver flowering 21.171
CRR073314Silver flowering 32.077
CRR073315Gold flowering 1140.390
CRR073316Gold flowering 2140.771
CRR073317Gold flowering 3140.944
CRR073318Tawny withering 188.651
CRR073319Tawny withering 268.486
CRR073320Tawny withering 387.792