Gene detail

Detail information of GWHGAAZE012598

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002267912.1	0	PREDICTED: uncharacterized protein LOC100240775 isoform X1 [Vitis vinifera]
Swissprot	tr\|P51568\|AFC3_ARATH	2E-41	Serine/threonine-protein kinase AFC3
trEMBL	tr\|D7T7E9\|D7T7E9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI26420.3}
TAIR10	AT5G35980.1	2E-147	yeast YAK1-related gene 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	88284492	88301730	+
GWHAAZE00000003	mRNA	88284492	88301730	+
GWHAAZE00000003	exon	88284492	88284647	+
GWHAAZE00000003	exon	88290720	88290919	+
GWHAAZE00000003	exon	88291828	88291978	+
GWHAAZE00000003	exon	88292060	88292169	+
GWHAAZE00000003	exon	88292295	88292364	+
GWHAAZE00000003	exon	88292468	88292550	+
GWHAAZE00000003	exon	88292641	88292719	+
GWHAAZE00000003	exon	88292806	88292846	+
GWHAAZE00000003	exon	88293325	88293447	+
GWHAAZE00000003	exon	88293883	88294246	+
GWHAAZE00000003	exon	88295003	88295178	+
GWHAAZE00000003	exon	88296059	88296209	+
GWHAAZE00000003	exon	88296557	88296671	+
GWHAAZE00000003	exon	88296800	88296882	+
GWHAAZE00000003	exon	88298138	88298212	+
GWHAAZE00000003	exon	88298380	88298454	+
GWHAAZE00000003	exon	88298584	88299425	+
GWHAAZE00000003	exon	88300385	88300549	+
GWHAAZE00000003	exon	88301001	88301302	+
GWHAAZE00000003	exon	88301654	88301730	+
GWHAAZE00000003	CDS	88284492	88284647	+
GWHAAZE00000003	CDS	88290720	88290919	+
GWHAAZE00000003	CDS	88291828	88291978	+
GWHAAZE00000003	CDS	88292060	88292169	+
GWHAAZE00000003	CDS	88292295	88292364	+
GWHAAZE00000003	CDS	88292468	88292550	+
GWHAAZE00000003	CDS	88292641	88292719	+
GWHAAZE00000003	CDS	88292806	88292846	+
GWHAAZE00000003	CDS	88293325	88293447	+
GWHAAZE00000003	CDS	88293883	88294246	+
GWHAAZE00000003	CDS	88295003	88295178	+
GWHAAZE00000003	CDS	88296059	88296209	+
GWHAAZE00000003	CDS	88296557	88296671	+
GWHAAZE00000003	CDS	88296800	88296882	+
GWHAAZE00000003	CDS	88298138	88298212	+
GWHAAZE00000003	CDS	88298380	88298454	+
GWHAAZE00000003	CDS	88298584	88299425	+
GWHAAZE00000003	CDS	88300385	88300549	+
GWHAAZE00000003	CDS	88301001	88301302	+
GWHAAZE00000003	CDS	88301654	88301730	+

Transcript Sequence
>GWHTAAZE012612 ATGGACGAGGAGGTCAGTACAGGCAAGGAAGGCGGTGCGGTAGCGGTACGGTGGCGTCCATGCCAGCTCATCTTCAGTCCTTATTCCCCCATTATTGGTACTGATGATGATGGCGCAAAATCCCAAACTTTGCGTCCTCTTGTTAGAAGAAGACCTTTGGTGGCAAGATTAACGAAGGATATTGTTGCGACTTACCAAATATGCAACCCTCAATTCCATTATTCAGAAGAATTGAATCCAAAGCGATTCCTGACAAGCCCATCTGCTGGAGTGCTCAATGATGGTTGTGATAATGCAAACTCAGACCTTATTCTCACTGTGAACTCTGCATTGGTTAATTTAGACACTCAGCGAAGATACATTGTCAAAGATATACTTGGCCAAGGGACATTTGGGCAAGTTGCCAAGTGCTTGACAGAAACAAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTACCAGCAGGCACTGGTTGAAGTATCAATTCTAACAACGTTAAATAAGAAGTTTGATCCTGAGGATAAGCATCACATTGTTCGCATTTATGATTACTTTGTCCACCAACGCCATTTGTGCATTGCATTTGAACTGCTCGACACTAACCTGTACGAGCTTATGAAGTTGAACCATTTTAGGGGATTGTCATTGAGCATTGTCCAGTTGTTCTCCAAACAGATATTGCGTGGATTGGCTCTGATGAAAGATGCTGGTATAATTCATTGCGATCTGAAACCAGAGAACATCCTTTTATGCACTAGTGTAAAGCCAGCAGAAATCAAAATCATAGACTTTGGGTCTGCATGCATGGAAGATCGGACTGTATACTCCTACATTCAGAGTCGGTACTATAGATCGCCTGAAGTACTTCTTGGATATCAATATAGCACTGCCATTGACATGTGGTCATTTGGGTGCATAGTTGCTGAATTATATCTTGGGTTGCCACTCTTCCCAGGAGCGTCAGAATTTGATCTTTTGAGGAGGATGATAAAAATATTAGGGATTGGTACACAATGCTGGAATGATGGAATGTCTGTTCCAGTTTTTCCACACCTTTTCTGTTGGTTTAGTGTATTCCTGTCCCCTTTGTTTGGGGTTTCTATAGTACATCTCTACCCATATTTGATTTTTATTTTGTCAATTTTTCTGAGAGAAGAAAAGCACTGTTGGGATGCAGAAGATGGGTCTAAGGAGTCTCTGCATCCTGTGGTTCATGGTGTTTTCCAGGCTGATGATTACGAATTACTACACAAACCTTTGGAGGAAAAAAGGATTACATTGCTTATGTTCTTCCTTCGATTCCTGCTGATCCTATCTCAGATTCTCTTGTTTCACATCATTATGCTTCTCCTCCTTGTAGATCTGGGTGAATTGCCTTCAGAGTGTACTATAGAGGATAATTTGACCGGAAAATATAAGAAAAGTGGAGGAGAAAGAGGTATTTTGGAAAGATCAATTCTTTTGGTTTCTCTTTGGAATTCTTCATCCAAGCACTTCCAAGATGACCCCGTCTTCTTTATATTGTTTGGTATTGGAGGGAGGGGACAACCCCCTGATTATCTACTAAAGGAGGCCAAGAACACCAGCAAGTTCTTTAAATGTGTTGGGAGTGTCAACAATGAAGAGAGTGTCCACCTTCCTATGAACAGACAGAGTGCTTACCTAGCTTTAACGGAGGAAGAATATGAAGTTAGGGAGTCGAAGAAACCGCCAATTGGGAAGGAATATTACAGTCATATGAACCTTGAAGCAATTGTCAAAAAATACCCTTATCGGAAAAACTTGCCAGAGGAAGATATGGTCAAAGAGAGTCGAGTACGGTTAGCGCTGATTGATTTCTTGAGGGGGCTTGTTGAATTTGATCCAGCAAAGCGGTGGTCACCTTTGCAGGCTTCTAAGCACCCTTTTGTCACTGGGGAACCCTTCACATCCCCTTATATACCTGCTCCGGAGACCCCACGCATGCCTGTTTGTCAGAATGCTAAGGTGGATCATCATCCAGCTGGAGGCCATTGGTTTGCTGCTGGTCTCTCTCCTAATGTTCCAGGAGGGAACCGAGTTGCCTTGCATAACAGCCCGCATTATCAAATGATGCCTTATGCGCATCCTGGTAGCTATGGTAGTTTGGGAAGCCATGGTAGCTATAACGATGGTACTGGAGCTGGAAGCAGCTATGGAAGCTATGGGGATAATAGTAATATGATTCAGTTTTATTCTCCAGTGGGTCCATCGGGGATGAATATCCATGGACAGGGTGGTGGTGTGCCTATACTTGGAACTAGTCCTGATGCAAGGCGAAGGATTATTCATCAATTCCCACATGGCGGGAATGGGCTTGGTGTAAGTCCAACCGGAAATTTTGCTCCAATGTCCCTTGGCACTAGTCCTTCACAATTTACTCCTCCAAACTCCTCTTACGGTCAAGTTTCAGCTGGTGGTTCCCCTGGACATTATGGTCCTAGTTCCCCAGCGAGAGGCAATTGTCACGGATCACCTTTAGGAAAAGTGGCTGCAGTTGGGCAGTTTAACAGAAGGAAAAATTGGGGATATTCTGCAAGTTTACAATCTCAGGAAAGTTCATCATCGTCATCTCCTCATTGGCAAGGGCAGTACCCTGATGGTAGCCAAGCTGAGGGAAACTCTCCAGTACATGGTGGTTCTTCATTGCATCTACAGCAAAACTCAAATTCTACAACAAGCTGGAGGCAGCAACAAGGAGGCGGTGGAAAGACCGCTGGTTATTCTACGTCTCATAATATCTCGAGTATGTCAACGCTTGGCTCTAATATGCAATTTCCACATCCCAAGGGAGCTACCATTCATGAAAAACCAGAGGCTAGTAACTCATTGCCTGATCCTGGAGATTGGGATCCCAACTACAGTGAAGAACTACTCCTTCAAGAGGATGGTTCAGATGTCAGCTCCCTGGCGAACGAGTTCAGCAAGAGTATGCATCTTGGTCAAGCTTTGGTTCCTACAGACCCATTGATTGGAGTGAGAAGGTTCAGCCGTACCTCAAACTCCAGCTCAAATATTCCAATGCAAAGACAAAATGTACCCATTCAAGCATTCTCGCATGGAGAGGTGGGCAGCCCTCCTTCGTCCCATGATTTCCATGGTGGGTATGCCCACGCCAATACAAAGCCTTCACATTTTGTGCCTCATTTCCCACAAAATTCTCCAAGCCGTTTGGGGCAGCAGCCGCCTCTACATAGGTTCAATCATGCGAGGTCAACAGCTGTTCGGGGAAGCGAATGGAATCATGTTATGGTTCACCAGCAGCAGCCCCCTCTTTCCAGCTTTAACTCGGGGGGGCCACGTTCTCCAGGAAGCAATGGCACGCCATGGGGACGAAGGGGCAACCATCCCGTCACCAATATTCCGCCAACATCCCGAGGAAGAAAAGACTATGGAAGAATTGCCTGA

Network for GWHGAAZE012598

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	121	338	6.80E-46

Protein Sequence

>GWHPAAZE012605
MDEEVSTGKEGGAVAVRWRPCQLIFSPYSPIIGTDDDGAKSQTLRPLVRRRPLVARLTKDIVATYQICNPQFHYSEELNPKRFLTSPSAGVLNDGCDNANSDLILTVNSALVNLDTQRRYIVKDILGQGTFGQVAKCLTETNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKFDPEDKHHIVRIYDYFVHQRHLCIAFELLDTNLYELMKLNHFRGLSLSIVQLFSKQILRGLALMKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYSTAIDMWSFGCIVAELYLGLPLFPGASEFDLLRRMIKILGIGTQCWNDGMSVPVFPHLFCWFSVFLSPLFGVSIVHLYPYLIFILSIFLREEKHCWDAEDGSKESLHPVVHGVFQADDYELLHKPLEEKRITLLMFFLRFLLILSQILLFHIIMLLLLVDLGELPSECTIEDNLTGKYKKSGGERGILERSILLVSLWNSSSKHFQDDPVFFILFGIGGRGQPPDYLLKEAKNTSKFFKCVGSVNNEESVHLPMNRQSAYLALTEEEYEVRESKKPPIGKEYYSHMNLEAIVKKYPYRKNLPEEDMVKESRVRLALIDFLRGLVEFDPAKRWSPLQASKHPFVTGEPFTSPYIPAPETPRMPVCQNAKVDHHPAGGHWFAAGLSPNVPGGNRVALHNSPHYQMMPYAHPGSYGSLGSHGSYNDGTGAGSSYGSYGDNSNMIQFYSPVGPSGMNIHGQGGGVPILGTSPDARRRIIHQFPHGGNGLGVSPTGNFAPMSLGTSPSQFTPPNSSYGQVSAGGSPGHYGPSSPARGNCHGSPLGKVAAVGQFNRRKNWGYSASLQSQESSSSSSPHWQGQYPDGSQAEGNSPVHGGSSLHLQQNSNSTTSWRQQQGGGGKTAGYSTSHNISSMSTLGSNMQFPHPKGATIHEKPEASNSLPDPGDWDPNYSEELLLQEDGSDVSSLANEFSKSMHLGQALVPTDPLIGVRRFSRTSNSSSNIPMQRQNVPIQAFSHGEVGSPPSSHDFHGGYAHANTKPSHFVPHFPQNSPSRLGQQPPLHRFNHARSTAVRGSEWNHVMVHQQQPPLSSFNSGGPRSPGSNGTPWGRRGNHPVTNIPPTSRGRKDYGRIA

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_DYRK-YAK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	34.043
	SRR3591706	second leaf	20.211
	SRR3591707	mature leaf	19.936
	SRR3591708	Shoot apex	26.022
	SRR3591709	Stem	39.894
	SRR3591710	White floral bud	37.534
	SRR3591711	White flower	37.758
	SRR3591712	Green floral bud	35.424
	SRR3591713	Yellow flower	35.450
SRP173429	SRR8316895	Juvenile bud stage	17.593
	SRR8316896	Juvenile bud stage	25.307
	SRR8316897	Juvenile bud stage	11.624
	SRR8316894	Third green stage	12.892
	SRR8316900	Third green stage	32.634
	SRR8316901	Third green stage	31.338
	SRR8316898	Complete white stage	13.459
	SRR8316899	Complete white stage	35.887
	SRR8316903	Complete white stage	22.385
	SRR8316902	Silver flowering stage	14.208
	SRR8316904	Silver flowering stage	21.003
	SRR8316905	Silver flowering stage	10.558
	SRR8316906	Gold flowering stage	35.688
	SRR8316907	Gold flowering stage	33.514
	SRR8316908	Gold flowering stage	35.325
SRP132670	SRR6706286	Control	25.123
	SRR6706287	Light intensity 50%	26.331
	SRR6706288	Light intensity 20%	28.314
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	19.326
	CNS0095593	Slightly white alabastrum(diploid) 2	17.157
	CNS0095594	Slightly white alabastrum(diploid) 3	17.253
	CNS0095595	Whole white alabastrum(diploid) 2	22.840
	CNS0095596	Whole white alabastrum(diploid) 3	23.244
	CNS0095597	Whole white alabastrum(diploid) 4	25.090
	CNS0095598	Silvery flower (diploied) 1	21.329
	CNS0095599	Silvery flower (diploied) 2	19.846
	CNS0095600	Silvery flower (diploied) 3	38.659
	CNS0095601	Golden flower (diploid) 1	16.231
	CNS0095602	Golden flower (diploid) 2	35.737
	CNS0095603	Golden flower (diploid) 3	33.922
	CNS0095604	Slightly white alabastrum(tetraploid) 1	29.590
	CNS0095605	Slightly white alabastrum(tetraploid) 2	22.760
	CNS0095606	Slightly white alabastrum(tetraploid) 3	31.330
	CNS0095607	Whole white alabastrum(tetraploid) 1	27.847
	CNS0095608	Whole white alabastrum(tetraploid) 2	27.760
	CNS0095609	Whole white alabastrum(tetraploid) 3	30.806
	CNS0095610	Silvery flower (tetraploid) 1	32.723
	CNS0095611	Silvery flower (tetraploid) 2	36.405
	CNS0095612	Silvery flower (tetraploid) 3	35.806
	CNS0095613	Golden flower (tetraploid) 1	16.115
	CNS0095614	Golden flower (tetraploid) 2	29.221
	CNS0095615	Golden flower (tetraploid) 3	38.548
CRA001975	CRR073297	Stem 1	26.676
	CRR073298	Stem 2	25.252
	CRR073299	Stem 3	23.154
	CRR073300	Leaf 1	32.306
	CRR073301	Leaf 2	27.860
	CRR073302	Leaf 3	21.688
	CRR073303	Juvenile bud 1	26.308
	CRR073304	Juvenile bud 2	19.855
	CRR073305	Juvenile bud 3	34.117
	CRR073306	Third green 1	16.628
	CRR073307	Third green 2	13.140
	CRR073308	Third green 3	18.366
	CRR073309	Second white 1	14.751
	CRR073310	Second white 2	16.495
	CRR073311	Second white 3	17.705
	CRR073312	Silver flowering 1	14.685
	CRR073313	Silver flowering 2	16.721
	CRR073314	Silver flowering 3	10.799
	CRR073315	Gold flowering 1	12.077
	CRR073316	Gold flowering 2	16.149
	CRR073317	Gold flowering 3	10.200
	CRR073318	Tawny withering 1	24.418
	CRR073319	Tawny withering 2	22.477
	CRR073320	Tawny withering 3	24.587