Detail information of GWHGAAZE012566


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010662958.11.2864E-102PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis vinifera]
Swissprottr|Q9C9F5|C3H15_ARATH2E-63Zinc finger CCCH domain-containing protein 15
trEMBLtr|D7T8Y6|D7T8Y6_VITVI2E-102Putative uncharacterized protein {ECO:0000313|EMBL:CBI26957.3}
TAIR10AT1G68200.13E-53Zinc finger C-x8-C-x5-C-x3-H type family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8784637687849058-
GWHAAZE00000003mRNA8784637687849058-
GWHAAZE00000003exon8784637687846675-
GWHAAZE00000003exon8784840287849058-
GWHAAZE00000003CDS8784840287849058-
GWHAAZE00000003CDS8784637687846675-
Transcript Sequence

Network for GWHGAAZE012566

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00642.25zf-CCCH2452692.70E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC3H

KEGG pathway

KO Enzyme pathway mapID
K18753ZFP36L Cellular senescence map04218

Gene Ontology

GO term OntologyName
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.387
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.405
SRR3591709Stem2.506
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.199
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.140
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.075
SRR8316900Third green stage 0.463
SRR8316901Third green stage 0.073
SRR8316898Complete white stage 0.088
SRR8316899Complete white stage 0.087
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.140
SRR6706287Light intensity 50%0.024
SRR6706288Light intensity 20%0.065
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.086
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.552
CNS0095595Whole white alabastrum(diploid) 20.174
CNS0095596Whole white alabastrum(diploid) 30.051
CNS0095597Whole white alabastrum(diploid) 40.233
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.182
CNS0095600Silvery flower (diploied) 30.053
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.101
CNS0095604Slightly white alabastrum(tetraploid) 10.319
CNS0095605Slightly white alabastrum(tetraploid) 20.076
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.119
CNS0095608Whole white alabastrum(tetraploid) 20.268
CNS0095609Whole white alabastrum(tetraploid) 30.183
CNS0095610Silvery flower (tetraploid) 10.079
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.280
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.049
CNS0095615Golden flower (tetraploid) 30.046
CRA001975CRR073297Stem 10.195
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.209
CRR073301Leaf 20.175
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.171
CRR073304Juvenile bud 20.377
CRR073305Juvenile bud 30.048
CRR073306Third green 10.047
CRR073307Third green 20.670
CRR073308Third green 30.394
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.107
CRR073312Silver flowering 10.269
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 14.310
CRR073319Tawny withering 22.907
CRR073320Tawny withering 39.330