Detail information of GWHGAAZE012557


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011070732.11.3466E-175PREDICTED: sec-independent protein translocase protein TATC, chloroplastic-like [Sesamum indicum]
Swissprottr|Q9SJV5|TATC_ARATH1E-153Sec-independent protein translocase protein TATC, chloroplastic (Precursor)
trEMBLtr|M1D0A0|M1D0A0_SOLTU7E-170Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400078514}
TAIR10AT2G01110.16E-110Sec-independent periplasmic protein translocase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8773163087735952-
GWHAAZE00000003mRNA8773163087735952-
GWHAAZE00000003exon8773564687735952-
GWHAAZE00000003exon8773329887733602-
GWHAAZE00000003exon8773273087733020-
GWHAAZE00000003exon8773163087732012-
GWHAAZE00000003five_prime_UTR8773587887735952-
GWHAAZE00000003CDS8773564687735877-
GWHAAZE00000003CDS8773329887733602-
GWHAAZE00000003CDS8773273087733020-
GWHAAZE00000003CDS8773180387732012-
GWHAAZE00000003three_prime_UTR8773163087731802-
Transcript Sequence

Network for GWHGAAZE012557

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00902.19TatC1203285.10E-61
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03118tatC Protein export map03060
Bacterial secretion systemmap03070

Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.119
SRR3591706second leaf86.700
SRR3591707mature leaf127.942
SRR3591708Shoot apex37.508
SRR3591709Stem40.384
SRR3591710White floral bud116.290
SRR3591711White flower159.896
SRR3591712Green floral bud71.122
SRR3591713Yellow flower170.788
SRP173429 SRR8316895Juvenile bud stage 27.165
SRR8316896Juvenile bud stage 34.272
SRR8316897Juvenile bud stage 17.852
SRR8316894Third green stage 16.276
SRR8316900Third green stage 75.884
SRR8316901Third green stage 66.372
SRR8316898Complete white stage 55.467
SRR8316899Complete white stage 123.134
SRR8316903Complete white stage 63.518
SRR8316902Silver flowering stage62.994
SRR8316904Silver flowering stage71.053
SRR8316905Silver flowering stage44.124
SRR8316906Gold flowering stage 150.148
SRR8316907Gold flowering stage 125.392
SRR8316908Gold flowering stage 141.045
SRP132670SRR6706286Control43.338
SRR6706287Light intensity 50%46.321
SRR6706288Light intensity 20%49.592
CNP0000432CNS0095592Slightly white alabastrum(diploid) 148.294
CNS0095593Slightly white alabastrum(diploid) 249.371
CNS0095594Slightly white alabastrum(diploid) 332.605
CNS0095595Whole white alabastrum(diploid) 260.650
CNS0095596Whole white alabastrum(diploid) 369.833
CNS0095597Whole white alabastrum(diploid) 456.522
CNS0095598Silvery flower (diploied) 183.661
CNS0095599Silvery flower (diploied) 290.418
CNS0095600Silvery flower (diploied) 3176.565
CNS0095601Golden flower (diploid) 1113.186
CNS0095602Golden flower (diploid) 2163.485
CNS0095603Golden flower (diploid) 3157.013
CNS0095604Slightly white alabastrum(tetraploid) 162.670
CNS0095605Slightly white alabastrum(tetraploid) 253.323
CNS0095606Slightly white alabastrum(tetraploid) 392.116
CNS0095607Whole white alabastrum(tetraploid) 144.331
CNS0095608Whole white alabastrum(tetraploid) 264.976
CNS0095609Whole white alabastrum(tetraploid) 3107.469
CNS0095610Silvery flower (tetraploid) 1235.598
CNS0095611Silvery flower (tetraploid) 2269.259
CNS0095612Silvery flower (tetraploid) 3276.429
CNS0095613Golden flower (tetraploid) 1241.139
CNS0095614Golden flower (tetraploid) 2233.097
CNS0095615Golden flower (tetraploid) 3184.864
CRA001975CRR073297Stem 132.065
CRR073298Stem 228.698
CRR073299Stem 331.648
CRR073300Leaf 142.052
CRR073301Leaf 237.765
CRR073302Leaf 341.720
CRR073303Juvenile bud 148.797
CRR073304Juvenile bud 261.919
CRR073305Juvenile bud 329.730
CRR073306Third green 156.447
CRR073307Third green 248.342
CRR073308Third green 346.081
CRR073309Second white 1108.058
CRR073310Second white 2116.597
CRR073311Second white 386.036
CRR073312Silver flowering 178.418
CRR073313Silver flowering 269.373
CRR073314Silver flowering 372.335
CRR073315Gold flowering 1179.258
CRR073316Gold flowering 2190.828
CRR073317Gold flowering 3140.896
CRR073318Tawny withering 117.792
CRR073319Tawny withering 217.809
CRR073320Tawny withering 318.550