Gene detail

Detail information of GWHGAAZE012525

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_008782395.1	PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9LV37\|MPK9_ARATH	Mitogen-activated protein kinase 9
trEMBL	tr\|D7SJ91\|D7SJ91_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI15552.3}
TAIR10	AT3G18040.1	MAP kinase 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	87176268	87180525	+
GWHAAZE00000003	mRNA	87176268	87180525	+
GWHAAZE00000003	exon	87176268	87176691	+
GWHAAZE00000003	exon	87176785	87176912	+
GWHAAZE00000003	exon	87177064	87177123	+
GWHAAZE00000003	exon	87178384	87178533	+
GWHAAZE00000003	exon	87179035	87179200	+
GWHAAZE00000003	exon	87179352	87179545	+
GWHAAZE00000003	exon	87179638	87179711	+
GWHAAZE00000003	exon	87179814	87179915	+
GWHAAZE00000003	exon	87180258	87180525	+
GWHAAZE00000003	CDS	87176268	87176691	+
GWHAAZE00000003	CDS	87176785	87176912	+
GWHAAZE00000003	CDS	87177064	87177123	+
GWHAAZE00000003	CDS	87178384	87178533	+
GWHAAZE00000003	CDS	87179035	87179200	+
GWHAAZE00000003	CDS	87179352	87179545	+
GWHAAZE00000003	CDS	87179638	87179711	+
GWHAAZE00000003	CDS	87179814	87179915	+
GWHAAZE00000003	CDS	87180258	87180525	+

Transcript Sequence
>GWHTAAZE012539 TTTGGTTCAACCCAGACAATGCTCGACAAAGAATTTTTCACAGAATATGGTGAAGCGAGTCTTTATGAAATCCAAGAGGTTGTTGGCAAGGGAAGTTACGGTGTTGTTGCAGCTGCAGTTGATACTCACACTGGCGATAGGGTAGCCATAAAAAAGATCAATGACGTTTTTGAGCATGTATCTGATGCCACTCGTATTCTTAGAGAAATTAAGCTCCTACGGCTGCTTAAACACCCAGATATTGTAGAAATAAAGCATATAATGCTTCCCCCATGTCGAAGGGAATTTAAAGATATATATGTTGTTTTTGAACTGATGGAATCTGATCTTCACCAAGTAATCAGGGCAAACGATGATCTTACTCCTGAACACTATCAATTTTTCTTGTACCAGCTTCTTCGAGCTTTAAAGTATATACATACAGCTCAAGTCTTCCATCGAGATTTAAAGCCAAAGAATATCCTGGCTAATGCAGATTGCAAATTGAAGATCTGTGACTTTGGGCTTGCACGTGTATCGTTTGATGATACCCCTTCAGCTATTTTTTGGACTGATTATGTAGCAACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCCAAGTACACGCCTGCTATTGATATCTGGAGCATAGGATGTATATTTGCAGAAATGCTTACAGGAAAACCTTTGTTTCCTGGGAAGAATGTGGTTCACCAATTGGATCTTGTCACTGATCTGCTTGGTACTCCTCCTGCTGAAACCATTTCCAGGATTCGAAATGAAAAGGCGAGACGATATTTAAGTAGCATGAGGAAAAAAGGTCCAATTCCTTTCTCACAAAAGTTCCCTAATGCCGATCCCTTGGCTCTTCACCTTCTCAAGGGTTTGCTTGCATTTGATCACAATGATCGTCTGTCTGCTGAAGAGATAAGATTTAGTTTGAGTTTTATATATTTTCTATTTATTGATACTGGGCTTCTCTTATGTTTACAGGCATTGGGGCATCCGTACTTTGAGAGTTTGGCTAATCTGGAGCATGAACCGTCCACGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGGAAATTGACGAAAGATGATGTTAGAGAGCTAATTTATAGAGAGATCTTGGAGTATCATCCACAGATGCTGCAGGAGTACCTTCACGGCGTTGAACAGACTAGCTTCATGTATCCAAGTGGAGCTGATCGGTTTAAGCAACAATTTGCCCATCTTGAACAGTACCATCGTAACGGAGAAAGGAGCACTCCTCTCCGACGGCAATATACCTCCTTGCCTAGAGAGCGGATCTGTGCATCCAAAGATGAGGGGTATCACGAAGACAATGATCTTGAAAATGCTGCAGCTGCTATTGTACGTACAACCCTTGAAAGCCCACCAAGGGCTCGCCAATCAAAATCTGTTGTAGTCAATATGCGGAATCGCCCAAGCAAACCGCCTTGCAGTTTTCAAGGCCTGTTGAGAAGTTCTAGCATTAGTGCTTCCCAGCATGTGGTAGTAAACGGAAGGGAATACGAGGTTAGTGATTTTCTATTTTATGATGGATAG

Network for GWHGAAZE012525

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	22	307	8.80E-65

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_MAPK

KEGG pathway

KO	Enzyme	pathway	mapID
K20538	MPK8	MAPK signaling pathway - plant	map04016

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004707	molecular_function	MAP kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	48.307
	SRR3591706	second leaf	20.970
	SRR3591707	mature leaf	25.160
	SRR3591708	Shoot apex	44.358
	SRR3591709	Stem	60.698
	SRR3591710	White floral bud	42.755
	SRR3591711	White flower	61.622
	SRR3591712	Green floral bud	34.865
	SRR3591713	Yellow flower	59.640
SRP173429	SRR8316895	Juvenile bud stage	35.976
	SRR8316896	Juvenile bud stage	58.648
	SRR8316897	Juvenile bud stage	29.033
	SRR8316894	Third green stage	27.164
	SRR8316900	Third green stage	59.131
	SRR8316901	Third green stage	60.136
	SRR8316898	Complete white stage	20.308
	SRR8316899	Complete white stage	63.279
	SRR8316903	Complete white stage	34.015
	SRR8316902	Silver flowering stage	22.364
	SRR8316904	Silver flowering stage	32.457
	SRR8316905	Silver flowering stage	15.597
	SRR8316906	Gold flowering stage	49.840
	SRR8316907	Gold flowering stage	46.374
	SRR8316908	Gold flowering stage	49.992
SRP132670	SRR6706286	Control	53.690
	SRR6706287	Light intensity 50%	62.185
	SRR6706288	Light intensity 20%	60.381
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	47.189
	CNS0095593	Slightly white alabastrum(diploid) 2	47.972
	CNS0095594	Slightly white alabastrum(diploid) 3	39.418
	CNS0095595	Whole white alabastrum(diploid) 2	36.540
	CNS0095596	Whole white alabastrum(diploid) 3	31.118
	CNS0095597	Whole white alabastrum(diploid) 4	33.914
	CNS0095598	Silvery flower (diploied) 1	52.017
	CNS0095599	Silvery flower (diploied) 2	37.107
	CNS0095600	Silvery flower (diploied) 3	43.087
	CNS0095601	Golden flower (diploid) 1	45.425
	CNS0095602	Golden flower (diploid) 2	42.096
	CNS0095603	Golden flower (diploid) 3	38.279
	CNS0095604	Slightly white alabastrum(tetraploid) 1	52.500
	CNS0095605	Slightly white alabastrum(tetraploid) 2	39.766
	CNS0095606	Slightly white alabastrum(tetraploid) 3	72.973
	CNS0095607	Whole white alabastrum(tetraploid) 1	30.638
	CNS0095608	Whole white alabastrum(tetraploid) 2	23.079
	CNS0095609	Whole white alabastrum(tetraploid) 3	43.627
	CNS0095610	Silvery flower (tetraploid) 1	78.507
	CNS0095611	Silvery flower (tetraploid) 2	60.738
	CNS0095612	Silvery flower (tetraploid) 3	51.767
	CNS0095613	Golden flower (tetraploid) 1	49.796
	CNS0095614	Golden flower (tetraploid) 2	63.081
	CNS0095615	Golden flower (tetraploid) 3	45.155
CRA001975	CRR073297	Stem 1	59.375
	CRR073298	Stem 2	48.498
	CRR073299	Stem 3	26.627
	CRR073300	Leaf 1	58.338
	CRR073301	Leaf 2	65.900
	CRR073302	Leaf 3	25.696
	CRR073303	Juvenile bud 1	26.932
	CRR073304	Juvenile bud 2	17.077
	CRR073305	Juvenile bud 3	28.584
	CRR073306	Third green 1	10.352
	CRR073307	Third green 2	11.520
	CRR073308	Third green 3	13.637
	CRR073309	Second white 1	14.504
	CRR073310	Second white 2	17.794
	CRR073311	Second white 3	15.503
	CRR073312	Silver flowering 1	11.286
	CRR073313	Silver flowering 2	9.698
	CRR073314	Silver flowering 3	10.582
	CRR073315	Gold flowering 1	10.693
	CRR073316	Gold flowering 2	17.462
	CRR073317	Gold flowering 3	6.103
	CRR073318	Tawny withering 1	41.882
	CRR073319	Tawny withering 2	48.662
	CRR073320	Tawny withering 3	47.626