Detail information of GWHGAAZE012498


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007045239.10O-Glycosyl hydrolases family 17 protein [Theobroma cacao]
Swissprottr|Q9ZU91|E133_ARATH0Glucan endo-1,3-beta-glucosidase 3 (Precursor)
trEMBLtr|A0A061E7Y2|A0A061E7Y2_THECC0O-Glycosyl hydrolases family 17 protein {ECO:0000313|EMBL:EOY01071.1}
TAIR10AT2G01630.10O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8658416486586546+
GWHAAZE00000003mRNA8658416486586546+
GWHAAZE00000003exon8658416486585415+
GWHAAZE00000003exon8658554686585573+
GWHAAZE00000003exon8658595286586546+
GWHAAZE00000003CDS8658416486585415+
GWHAAZE00000003CDS8658554686585573+
GWHAAZE00000003CDS8658595286586105+
GWHAAZE00000003three_prime_UTR8658610686586546+
Transcript Sequence

Network for GWHGAAZE012498

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.19Glyco_hydro_1733224.40E-80
PF07983.14X83404117.10E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19891GN1_2_3 Metabolic pathways map01100
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.618
SRR3591706second leaf9.033
SRR3591707mature leaf2.708
SRR3591708Shoot apex26.040
SRR3591709Stem16.220
SRR3591710White floral bud10.732
SRR3591711White flower8.702
SRR3591712Green floral bud20.971
SRR3591713Yellow flower2.921
SRP173429 SRR8316895Juvenile bud stage 16.463
SRR8316896Juvenile bud stage 19.610
SRR8316897Juvenile bud stage 14.319
SRR8316894Third green stage 6.219
SRR8316900Third green stage 16.762
SRR8316901Third green stage 15.821
SRR8316898Complete white stage 2.829
SRR8316899Complete white stage 13.672
SRR8316903Complete white stage 8.530
SRR8316902Silver flowering stage3.593
SRR8316904Silver flowering stage3.032
SRR8316905Silver flowering stage1.273
SRR8316906Gold flowering stage 3.492
SRR8316907Gold flowering stage 3.624
SRR8316908Gold flowering stage 4.478
SRP132670SRR6706286Control24.141
SRR6706287Light intensity 50%24.198
SRR6706288Light intensity 20%21.586
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.527
CNS0095593Slightly white alabastrum(diploid) 227.109
CNS0095594Slightly white alabastrum(diploid) 321.807
CNS0095595Whole white alabastrum(diploid) 214.988
CNS0095596Whole white alabastrum(diploid) 316.919
CNS0095597Whole white alabastrum(diploid) 414.240
CNS0095598Silvery flower (diploied) 113.530
CNS0095599Silvery flower (diploied) 213.870
CNS0095600Silvery flower (diploied) 311.031
CNS0095601Golden flower (diploid) 114.375
CNS0095602Golden flower (diploid) 210.655
CNS0095603Golden flower (diploid) 310.369
CNS0095604Slightly white alabastrum(tetraploid) 116.774
CNS0095605Slightly white alabastrum(tetraploid) 216.028
CNS0095606Slightly white alabastrum(tetraploid) 326.570
CNS0095607Whole white alabastrum(tetraploid) 18.199
CNS0095608Whole white alabastrum(tetraploid) 26.337
CNS0095609Whole white alabastrum(tetraploid) 314.312
CNS0095610Silvery flower (tetraploid) 17.107
CNS0095611Silvery flower (tetraploid) 28.587
CNS0095612Silvery flower (tetraploid) 37.716
CNS0095613Golden flower (tetraploid) 13.614
CNS0095614Golden flower (tetraploid) 24.363
CNS0095615Golden flower (tetraploid) 32.677
CRA001975CRR073297Stem 130.958
CRR073298Stem 230.209
CRR073299Stem 337.478
CRR073300Leaf 122.052
CRR073301Leaf 228.629
CRR073302Leaf 326.613
CRR073303Juvenile bud 122.428
CRR073304Juvenile bud 213.376
CRR073305Juvenile bud 336.188
CRR073306Third green 16.757
CRR073307Third green 26.730
CRR073308Third green 37.553
CRR073309Second white 15.559
CRR073310Second white 23.190
CRR073311Second white 34.227
CRR073312Silver flowering 13.148
CRR073313Silver flowering 23.890
CRR073314Silver flowering 31.935
CRR073315Gold flowering 17.122
CRR073316Gold flowering 211.990
CRR073317Gold flowering 39.018
CRR073318Tawny withering 130.674
CRR073319Tawny withering 223.584
CRR073320Tawny withering 339.354