Detail information of GWHGAAZE012479


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010649544.11.23857E-45PREDICTED: uncharacterized protein LOC100247341 [Vitis vinifera]
trEMBLtr|D7T8I1|D7T8I1_VITVI5E-46Putative uncharacterized protein {ECO:0000313|EMBL:CBI26802.3}
TAIR10AT2G01818.16E-25PLATZ transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8627122186271604+
GWHAAZE00000003mRNA8627122186271604+
GWHAAZE00000003exon8627122186271223+
GWHAAZE00000003exon8627131486271604+
GWHAAZE00000003CDS8627122186271223+
GWHAAZE00000003CDS8627131486271604+
Transcript Sequence

Network for GWHGAAZE012479

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04640.15PLATZ70935.40E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.865
SRR3591706second leaf0.347
SRR3591707mature leaf0.000
SRR3591708Shoot apex2.756
SRR3591709Stem2.335
SRR3591710White floral bud0.069
SRR3591711White flower0.000
SRR3591712Green floral bud0.847
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.593
SRR8316896Juvenile bud stage 0.415
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.548
SRR8316900Third green stage 0.828
SRR8316901Third green stage 1.472
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.344
SRR8316903Complete white stage 0.268
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.547
SRR6706287Light intensity 50%0.774
SRR6706288Light intensity 20%0.173
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.119
CNS0095593Slightly white alabastrum(diploid) 21.907
CNS0095594Slightly white alabastrum(diploid) 30.232
CNS0095595Whole white alabastrum(diploid) 21.592
CNS0095596Whole white alabastrum(diploid) 31.273
CNS0095597Whole white alabastrum(diploid) 41.072
CNS0095598Silvery flower (diploied) 10.594
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.200
CNS0095604Slightly white alabastrum(tetraploid) 10.792
CNS0095605Slightly white alabastrum(tetraploid) 20.048
CNS0095606Slightly white alabastrum(tetraploid) 31.159
CNS0095607Whole white alabastrum(tetraploid) 10.098
CNS0095608Whole white alabastrum(tetraploid) 20.081
CNS0095609Whole white alabastrum(tetraploid) 31.174
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.427
CRR073298Stem 23.815
CRR073299Stem 31.966
CRR073300Leaf 11.364
CRR073301Leaf 21.046
CRR073302Leaf 31.420
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.203
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.177
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.239
CRR073319Tawny withering 20.381
CRR073320Tawny withering 31.627