Detail information of GWHGAAZE012347


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO72201.10hypothetical protein CISIN_1g011868mg [Citrus sinensis]
Swissprottr|Q8RWC9|CIPK1_ARATH3E-117CBL-interacting serine/threonine-protein kinase 1
trEMBLtr|A0A067GA24|A0A067GA24_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO72201.1}
TAIR10AT3G17510.16E-97CBL-interacting protein kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8406790784074225-
GWHAAZE00000003mRNA8406790784074225-
GWHAAZE00000003exon8407384284074225-
GWHAAZE00000003exon8407343584073497-
GWHAAZE00000003exon8407007884070149-
GWHAAZE00000003exon8406988584069992-
GWHAAZE00000003exon8406960584069685-
GWHAAZE00000003exon8406938484069516-
GWHAAZE00000003exon8406867984068803-
GWHAAZE00000003exon8406843884068554-
GWHAAZE00000003exon8406824484068306-
GWHAAZE00000003exon8406805884068132-
GWHAAZE00000003exon8406790784067960-
GWHAAZE00000003five_prime_UTR8407402584074225-
GWHAAZE00000003CDS8407384284074024-
GWHAAZE00000003CDS8407343584073497-
GWHAAZE00000003CDS8407007884070149-
GWHAAZE00000003CDS8406988584069992-
GWHAAZE00000003CDS8406960584069685-
GWHAAZE00000003CDS8406938484069516-
GWHAAZE00000003CDS8406867984068803-
GWHAAZE00000003CDS8406843884068554-
GWHAAZE00000003CDS8406824484068306-
GWHAAZE00000003CDS8406805884068132-
GWHAAZE00000003CDS8406790784067960-
Transcript Sequence

Network for GWHGAAZE012347

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase172208.70E-62
PF03822.15NAF2312903.50E-18
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
K07198PRKAA, AMPK Apelin signaling pathway map04371
FoxO signaling pathwaymap04068
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Tight junctionmap04530
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Axon regenerationmap04361
Longevity regulating pathwaymap04211
Longevity regulating pathway - multiple speciesmap04213
Circadian rhythmmap04710
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0007165biological_processsignal transduction
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.344
SRR3591706second leaf10.767
SRR3591707mature leaf15.418
SRR3591708Shoot apex8.016
SRR3591709Stem22.088
SRR3591710White floral bud16.745
SRR3591711White flower23.766
SRR3591712Green floral bud12.073
SRR3591713Yellow flower42.199
SRP173429 SRR8316895Juvenile bud stage 15.171
SRR8316896Juvenile bud stage 23.205
SRR8316897Juvenile bud stage 7.334
SRR8316894Third green stage 7.316
SRR8316900Third green stage 11.892
SRR8316901Third green stage 12.961
SRR8316898Complete white stage 7.143
SRR8316899Complete white stage 13.905
SRR8316903Complete white stage 13.178
SRR8316902Silver flowering stage8.736
SRR8316904Silver flowering stage12.611
SRR8316905Silver flowering stage5.526
SRR8316906Gold flowering stage 24.261
SRR8316907Gold flowering stage 22.533
SRR8316908Gold flowering stage 18.917
SRP132670SRR6706286Control8.779
SRR6706287Light intensity 50%7.757
SRR6706288Light intensity 20%7.931
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.503
CNS0095593Slightly white alabastrum(diploid) 28.739
CNS0095594Slightly white alabastrum(diploid) 311.784
CNS0095595Whole white alabastrum(diploid) 29.557
CNS0095596Whole white alabastrum(diploid) 39.617
CNS0095597Whole white alabastrum(diploid) 410.585
CNS0095598Silvery flower (diploied) 110.594
CNS0095599Silvery flower (diploied) 28.865
CNS0095600Silvery flower (diploied) 317.578
CNS0095601Golden flower (diploid) 112.591
CNS0095602Golden flower (diploid) 220.866
CNS0095603Golden flower (diploid) 320.336
CNS0095604Slightly white alabastrum(tetraploid) 19.267
CNS0095605Slightly white alabastrum(tetraploid) 27.997
CNS0095606Slightly white alabastrum(tetraploid) 310.476
CNS0095607Whole white alabastrum(tetraploid) 112.801
CNS0095608Whole white alabastrum(tetraploid) 210.538
CNS0095609Whole white alabastrum(tetraploid) 312.804
CNS0095610Silvery flower (tetraploid) 121.580
CNS0095611Silvery flower (tetraploid) 215.943
CNS0095612Silvery flower (tetraploid) 314.638
CNS0095613Golden flower (tetraploid) 116.929
CNS0095614Golden flower (tetraploid) 216.682
CNS0095615Golden flower (tetraploid) 337.102
CRA001975CRR073297Stem 128.016
CRR073298Stem 222.400
CRR073299Stem 329.207
CRR073300Leaf 112.885
CRR073301Leaf 211.714
CRR073302Leaf 39.943
CRR073303Juvenile bud 19.754
CRR073304Juvenile bud 28.681
CRR073305Juvenile bud 39.089
CRR073306Third green 15.967
CRR073307Third green 26.814
CRR073308Third green 36.478
CRR073309Second white 16.379
CRR073310Second white 29.854
CRR073311Second white 39.071
CRR073312Silver flowering 19.939
CRR073313Silver flowering 26.676
CRR073314Silver flowering 39.194
CRR073315Gold flowering 13.255
CRR073316Gold flowering 24.983
CRR073317Gold flowering 31.879
CRR073318Tawny withering 121.580
CRR073319Tawny withering 219.308
CRR073320Tawny withering 317.673