Detail information of GWHGAAZE012341


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP23343.10hypothetical protein JCGZ_23176 [Jatropha curcas]
Swissprottr|Q8LEB6|Y5185_ARATH0Probable receptor-like protein kinase At5g18500
trEMBLtr|A0A067JKK8|A0A067JKK8_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP23343.1}
TAIR10AT1G56720.35E-169Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8399860584001751-
GWHAAZE00000003mRNA8399860584001751-
GWHAAZE00000003exon8399860583998751-
GWHAAZE00000003exon8399924583999457-
GWHAAZE00000003exon8399969783999826-
GWHAAZE00000003exon8399994284000112-
GWHAAZE00000003exon8400023084000352-
GWHAAZE00000003exon8400067784000781-
GWHAAZE00000003exon8400114784001751-
GWHAAZE00000003CDS8400114784001751-
GWHAAZE00000003CDS8400067784000781-
GWHAAZE00000003CDS8400023084000352-
GWHAAZE00000003CDS8399994284000112-
GWHAAZE00000003CDS8399969783999826-
GWHAAZE00000003CDS8399924583999457-
GWHAAZE00000003CDS8399860583998751-
Transcript Sequence

Network for GWHGAAZE012341

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1694364.90E-48
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-V

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf41.493
SRR3591706second leaf21.352
SRR3591707mature leaf20.923
SRR3591708Shoot apex19.376
SRR3591709Stem111.094
SRR3591710White floral bud7.955
SRR3591711White flower23.482
SRR3591712Green floral bud12.991
SRR3591713Yellow flower40.035
SRP173429 SRR8316895Juvenile bud stage 10.674
SRR8316896Juvenile bud stage 16.727
SRR8316897Juvenile bud stage 7.021
SRR8316894Third green stage 5.728
SRR8316900Third green stage 12.476
SRR8316901Third green stage 15.329
SRR8316898Complete white stage 1.706
SRR8316899Complete white stage 3.370
SRR8316903Complete white stage 3.131
SRR8316902Silver flowering stage9.024
SRR8316904Silver flowering stage13.492
SRR8316905Silver flowering stage6.876
SRR8316906Gold flowering stage 47.235
SRR8316907Gold flowering stage 55.060
SRR8316908Gold flowering stage 36.900
SRP132670SRR6706286Control6.765
SRR6706287Light intensity 50%6.331
SRR6706288Light intensity 20%5.734
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.539
CNS0095593Slightly white alabastrum(diploid) 211.287
CNS0095594Slightly white alabastrum(diploid) 313.476
CNS0095595Whole white alabastrum(diploid) 29.841
CNS0095596Whole white alabastrum(diploid) 312.273
CNS0095597Whole white alabastrum(diploid) 45.521
CNS0095598Silvery flower (diploied) 111.329
CNS0095599Silvery flower (diploied) 28.095
CNS0095600Silvery flower (diploied) 36.406
CNS0095601Golden flower (diploid) 18.374
CNS0095602Golden flower (diploid) 219.275
CNS0095603Golden flower (diploid) 317.086
CNS0095604Slightly white alabastrum(tetraploid) 116.841
CNS0095605Slightly white alabastrum(tetraploid) 215.291
CNS0095606Slightly white alabastrum(tetraploid) 314.940
CNS0095607Whole white alabastrum(tetraploid) 113.232
CNS0095608Whole white alabastrum(tetraploid) 29.804
CNS0095609Whole white alabastrum(tetraploid) 311.003
CNS0095610Silvery flower (tetraploid) 117.023
CNS0095611Silvery flower (tetraploid) 214.990
CNS0095612Silvery flower (tetraploid) 350.394
CNS0095613Golden flower (tetraploid) 135.494
CNS0095614Golden flower (tetraploid) 226.233
CNS0095615Golden flower (tetraploid) 353.753
CRA001975CRR073297Stem 117.397
CRR073298Stem 211.068
CRR073299Stem 312.872
CRR073300Leaf 18.183
CRR073301Leaf 29.605
CRR073302Leaf 37.321
CRR073303Juvenile bud 12.048
CRR073304Juvenile bud 21.345
CRR073305Juvenile bud 32.916
CRR073306Third green 1138.356
CRR073307Third green 283.149
CRR073308Third green 3102.466
CRR073309Second white 1151.010
CRR073310Second white 2174.453
CRR073311Second white 3144.356
CRR073312Silver flowering 1129.571
CRR073313Silver flowering 2108.634
CRR073314Silver flowering 3106.068
CRR073315Gold flowering 112.406
CRR073316Gold flowering 222.259
CRR073317Gold flowering 313.692
CRR073318Tawny withering 143.700
CRR073319Tawny withering 238.070
CRR073320Tawny withering 356.991