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Detail information of GWHGAAZE012318
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_007035887.1
1.9881E-164
Gibberellin 2-oxidase [Theobroma cacao]
Swissprot
tr|Q9XHM5|G2OX2_PEA
6E-137
Gibberellin 2-beta-dioxygenase 2
trEMBL
tr|A0A061EQ73|A0A061EQ73_THECC
7E-165
Gibberellin 2-oxidase {ECO:0000313|EMBL:EOY06813.1}
TAIR10
AT1G02400.1
1E-94
gibberellin 2-oxidase 6
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000003
gene
83548676
83552335
+
GWHAAZE00000003
mRNA
83548676
83552335
+
GWHAAZE00000003
exon
83548676
83549058
+
GWHAAZE00000003
exon
83551288
83551723
+
GWHAAZE00000003
exon
83552096
83552335
+
GWHAAZE00000003
CDS
83548676
83549058
+
GWHAAZE00000003
CDS
83551288
83551723
+
GWHAAZE00000003
CDS
83552096
83552335
+
Transcript Sequence
>GWHTAAZE012332 ATGGTGGTGGTAACTCCAACTACAAATATTCGAACTGAAAAAATCAGAGATTTGGATCTTCCGATCATTGACCTTTCGGCTGATAGATCAGAGGTCTCAAAGCTCATTGTCAAATCTTGTGAAGACTTTGGTTTCTTTAAGGTCATCAACCATGGAGTCCCTCTTGATATTATCAATAAAATGGAAGATGAAAGCTTCGGGTTTTTTGCCAAGCCCGGGCCAGATAAACAGCGGGCCGGTCCGGCTAACCCGTTCGGGTATGGGAGCAAGAACATAGGCTTTAATGGAGATATTGGAGAGGTTGAATATCTTCTTCTTAATACCAATCCTCTCACTATTTCTCACTTGTCCAAATCCATCTCCACCGACCCCTCAAAATTCAGCCGTGCAGTGAGTGGTTATGTAGAATCAGTTAGGGGACTGGCATGTGAGATATTGGAATTGATGGCAGAAGGGCTGTGGGTCCCGGACACCTCTGTGTTCAGTAGGCTGATCAGGGCCGTTGATAGTGACTCGCTCCTCAGGTTCAATCACTATCCACCACTGGATAGGGACACTCAACCTTCCTCATTTCATCATCATCATCATCATCAAAGCAGTAACAACAACAGGATTGGGTTCGGAGAGCATTCTGACCCTCAGATGTTGACCATCTTGAGATCCAACGATGTGGGTGGACTACAGATCTCTCTTGAGGATGGGGTGTGGGTCCCAGTCACCCCTGACCCCACTGCCTTCTGTGTCAATGTGGGTGACGTGTTGCAGGTGGTTCCCTCCTTCCTTCTCCTCCCCTTCGTGAATCATCATAATCCTAAAAAGGCTATGACAAATGGAAGGTTTGTGAGTGTGAGGCACAGAGCAATGGCAAACTCATATAAACCCAGAATGTCAATGGCCTATTTTGGCGCTCCACCACTCCATGCATTAATCGCTTGTACCCCAGAATTGGTTTCCCCACAGAAGCCTTACCCCTACAGACCATTCACTTGGGGTGAATACAAAAAGGCTACGTATTCCCTACGACTTGGAGATAGTCGGCTTAATCTTTTCAGAGTTTAA
Network for GWHGAAZE012318
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF14226.7
DIOX_N
20
84
9.30E-14
PF03171.21
2OG-FeII_Oxy
172
302
2.80E-17
Protein Sequence
>GWHPAAZE012325 MVVVTPTTNIRTEKIRDLDLPIIDLSADRSEVSKLIVKSCEDFGFFKVINHGVPLDIINKMEDESFGFFAKPGPDKQRAGPANPFGYGSKNIGFNGDIGEVEYLLLNTNPLTISHLSKSISTDPSKFSRAVSGYVESVRGLACEILELMAEGLWVPDTSVFSRLIRAVDSDSLLRFNHYPPLDRDTQPSSFHHHHHHQSSNNNRIGFGEHSDPQMLTILRSNDVGGLQISLEDGVWVPVTPDPTAFCVNVGDVLQVVPSFLLLPFVNHHNPKKAMTNGRFVSVRHRAMANSYKPRMSMAYFGAPPLHALIACTPELVSPQKPYPYRPFTWGEYKKATYSLRLGDSRLNLFRV
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K04125
E1.14.11.13
Biosynthesis of secondary metabolites
map01110
Diterpenoid biosynthesis
map00904
Gene Ontology
GO term
Ontology
Name
GO:0055114
biological_process
oxidation-reduction process
GO:0016491
molecular_function
oxidoreductase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
2.497
SRR3591706
second leaf
0.274
SRR3591707
mature leaf
0.106
SRR3591708
Shoot apex
1.543
SRR3591709
Stem
0.211
SRR3591710
White floral bud
0.265
SRR3591711
White flower
0.000
SRR3591712
Green floral bud
0.203
SRR3591713
Yellow flower
0.321
SRP173429
SRR8316895
Juvenile bud stage
0.161
SRR8316896
Juvenile bud stage
0.312
SRR8316897
Juvenile bud stage
0.201
SRR8316894
Third green stage
0.252
SRR8316900
Third green stage
1.101
SRR8316901
Third green stage
1.203
SRR8316898
Complete white stage
0.086
SRR8316899
Complete white stage
2.958
SRR8316903
Complete white stage
0.257
SRR8316902
Silver flowering stage
0.068
SRR8316904
Silver flowering stage
0.146
SRR8316905
Silver flowering stage
0.000
SRR8316906
Gold flowering stage
0.059
SRR8316907
Gold flowering stage
0.000
SRR8316908
Gold flowering stage
0.000
SRP132670
SRR6706286
Control
0.352
SRR6706287
Light intensity 50%
0.724
SRR6706288
Light intensity 20%
0.771
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
0.566
CNS0095593
Slightly white alabastrum(diploid) 2
1.018
CNS0095594
Slightly white alabastrum(diploid) 3
0.237
CNS0095595
Whole white alabastrum(diploid) 2
0.454
CNS0095596
Whole white alabastrum(diploid) 3
0.210
CNS0095597
Whole white alabastrum(diploid) 4
0.844
CNS0095598
Silvery flower (diploied) 1
0.464
CNS0095599
Silvery flower (diploied) 2
0.291
CNS0095600
Silvery flower (diploied) 3
0.096
CNS0095601
Golden flower (diploid) 1
0.224
CNS0095602
Golden flower (diploid) 2
0.165
CNS0095603
Golden flower (diploid) 3
0.238
CNS0095604
Slightly white alabastrum(tetraploid) 1
0.059
CNS0095605
Slightly white alabastrum(tetraploid) 2
0.271
CNS0095606
Slightly white alabastrum(tetraploid) 3
0.794
CNS0095607
Whole white alabastrum(tetraploid) 1
0.407
CNS0095608
Whole white alabastrum(tetraploid) 2
0.051
CNS0095609
Whole white alabastrum(tetraploid) 3
0.234
CNS0095610
Silvery flower (tetraploid) 1
0.269
CNS0095611
Silvery flower (tetraploid) 2
0.015
CNS0095612
Silvery flower (tetraploid) 3
0.194
CNS0095613
Golden flower (tetraploid) 1
0.093
CNS0095614
Golden flower (tetraploid) 2
0.076
CNS0095615
Golden flower (tetraploid) 3
0.000
CRA001975
CRR073297
Stem 1
0.311
CRR073298
Stem 2
0.334
CRR073299
Stem 3
0.052
CRR073300
Leaf 1
0.454
CRR073301
Leaf 2
0.999
CRR073302
Leaf 3
0.744
CRR073303
Juvenile bud 1
1.464
CRR073304
Juvenile bud 2
0.465
CRR073305
Juvenile bud 3
1.811
CRR073306
Third green 1
0.842
CRR073307
Third green 2
1.417
CRR073308
Third green 3
1.316
CRR073309
Second white 1
0.096
CRR073310
Second white 2
0.133
CRR073311
Second white 3
0.125
CRR073312
Silver flowering 1
0.221
CRR073313
Silver flowering 2
0.272
CRR073314
Silver flowering 3
0.120
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.000
CRR073317
Gold flowering 3
0.000
CRR073318
Tawny withering 1
0.000
CRR073319
Tawny withering 2
0.083
CRR073320
Tawny withering 3
0.216