Detail information of GWHGAAZE012232


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010314706.15.292E-164PREDICTED: chaperone protein dnaJ 49 [Solanum lycopersicum]
Swissprottr|Q9FH28|DNJ49_ARATH4E-112Chaperone protein dnaJ 49
trEMBLtr|M1A0I2|M1A0I2_SOLTU1E-159Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400011991}
TAIR10AT5G49060.11E-81Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8212416082125206+
GWHAAZE00000003mRNA8212416082125206+
GWHAAZE00000003exon8212416082125206+
GWHAAZE00000003CDS8212416082125206+
Transcript Sequence

Network for GWHGAAZE012232

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0293map04141 Protein processing in endoplasmic reticulum
GO:0016787 hydrolase activity GOslim:molecular_function
map04137 Mitophagy - animal
map04146 Peroxisome


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00226.32DnaJ1031642.00E-23
PF09320.12DUF19772593293.80E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09518DNAJB12 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf37.583
SRR3591706second leaf28.950
SRR3591707mature leaf30.330
SRR3591708Shoot apex33.535
SRR3591709Stem46.728
SRR3591710White floral bud64.871
SRR3591711White flower63.769
SRR3591712Green floral bud58.505
SRR3591713Yellow flower58.960
SRP173429 SRR8316895Juvenile bud stage 25.752
SRR8316896Juvenile bud stage 38.648
SRR8316897Juvenile bud stage 14.667
SRR8316894Third green stage 15.909
SRR8316900Third green stage 52.169
SRR8316901Third green stage 50.798
SRR8316898Complete white stage 45.451
SRR8316899Complete white stage 90.632
SRR8316903Complete white stage 57.186
SRR8316902Silver flowering stage40.371
SRR8316904Silver flowering stage44.697
SRR8316905Silver flowering stage21.129
SRR8316906Gold flowering stage 72.215
SRR8316907Gold flowering stage 61.666
SRR8316908Gold flowering stage 66.500
SRP132670SRR6706286Control40.725
SRR6706287Light intensity 50%47.394
SRR6706288Light intensity 20%51.404
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.102
CNS0095593Slightly white alabastrum(diploid) 228.539
CNS0095594Slightly white alabastrum(diploid) 327.438
CNS0095595Whole white alabastrum(diploid) 232.776
CNS0095596Whole white alabastrum(diploid) 332.702
CNS0095597Whole white alabastrum(diploid) 435.472
CNS0095598Silvery flower (diploied) 129.080
CNS0095599Silvery flower (diploied) 227.571
CNS0095600Silvery flower (diploied) 353.996
CNS0095601Golden flower (diploid) 131.264
CNS0095602Golden flower (diploid) 253.128
CNS0095603Golden flower (diploid) 351.279
CNS0095604Slightly white alabastrum(tetraploid) 132.667
CNS0095605Slightly white alabastrum(tetraploid) 226.906
CNS0095606Slightly white alabastrum(tetraploid) 347.876
CNS0095607Whole white alabastrum(tetraploid) 127.731
CNS0095608Whole white alabastrum(tetraploid) 228.589
CNS0095609Whole white alabastrum(tetraploid) 340.999
CNS0095610Silvery flower (tetraploid) 151.070
CNS0095611Silvery flower (tetraploid) 244.180
CNS0095612Silvery flower (tetraploid) 361.240
CNS0095613Golden flower (tetraploid) 133.005
CNS0095614Golden flower (tetraploid) 240.020
CNS0095615Golden flower (tetraploid) 359.535
CRA001975CRR073297Stem 153.026
CRR073298Stem 249.217
CRR073299Stem 358.955
CRR073300Leaf 160.976
CRR073301Leaf 253.716
CRR073302Leaf 359.840
CRR073303Juvenile bud 173.166
CRR073304Juvenile bud 277.265
CRR073305Juvenile bud 368.698
CRR073306Third green 187.297
CRR073307Third green 280.917
CRR073308Third green 381.246
CRR073309Second white 186.209
CRR073310Second white 269.247
CRR073311Second white 365.576
CRR073312Silver flowering 173.204
CRR073313Silver flowering 273.545
CRR073314Silver flowering 365.932
CRR073315Gold flowering 135.639
CRR073316Gold flowering 248.001
CRR073317Gold flowering 344.113
CRR073318Tawny withering 151.172
CRR073319Tawny withering 245.469
CRR073320Tawny withering 352.847