Detail information of GWHGAAZE012180


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008804564.10PREDICTED: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Phoenix dactylifera]
Swissprottr|Q9FEE2|TON2_ARATH0Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
trEMBLtr|A0A068TRF4|A0A068TRF4_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_3 {ECO:0000313|EMBL:CDO98895.1}
TAIR10AT5G18580.10tonneau 2 (TON2)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8133968081348331-
GWHAAZE00000003mRNA8133968081348331-
GWHAAZE00000003exon8133968081339917-
GWHAAZE00000003exon8134051481340826-
GWHAAZE00000003exon8134165781341758-
GWHAAZE00000003exon8134237681342451-
GWHAAZE00000003exon8134364981343713-
GWHAAZE00000003exon8134423781344369-
GWHAAZE00000003exon8134453281344603-
GWHAAZE00000003exon8134633281346430-
GWHAAZE00000003exon8134674881346810-
GWHAAZE00000003exon8134710681347197-
GWHAAZE00000003exon8134819081348331-
GWHAAZE00000003CDS8134819081348331-
GWHAAZE00000003CDS8134710681347197-
GWHAAZE00000003CDS8134674881346810-
GWHAAZE00000003CDS8134633281346430-
GWHAAZE00000003CDS8134453281344603-
GWHAAZE00000003CDS8134423781344369-
GWHAAZE00000003CDS8134364981343713-
GWHAAZE00000003CDS8134237681342451-
GWHAAZE00000003CDS8134165781341758-
GWHAAZE00000003CDS8134051481340826-
GWHAAZE00000003CDS8133968081339917-
Transcript Sequence

Network for GWHGAAZE012180

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13202.7EF-hand_52482680.0012
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11583PPP2R3 mRNA surveillance pathway map03015
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728

Gene Ontology

GO term OntologyName
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.371
SRR3591706second leaf25.645
SRR3591707mature leaf19.374
SRR3591708Shoot apex43.953
SRR3591709Stem31.345
SRR3591710White floral bud31.920
SRR3591711White flower32.005
SRR3591712Green floral bud40.099
SRR3591713Yellow flower20.536
SRP173429 SRR8316895Juvenile bud stage 24.462
SRR8316896Juvenile bud stage 28.741
SRR8316897Juvenile bud stage 14.144
SRR8316894Third green stage 13.127
SRR8316900Third green stage 34.850
SRR8316901Third green stage 33.015
SRR8316898Complete white stage 14.736
SRR8316899Complete white stage 44.136
SRR8316903Complete white stage 25.527
SRR8316902Silver flowering stage15.648
SRR8316904Silver flowering stage21.786
SRR8316905Silver flowering stage8.715
SRR8316906Gold flowering stage 30.691
SRR8316907Gold flowering stage 31.033
SRR8316908Gold flowering stage 29.372
SRP132670SRR6706286Control32.208
SRR6706287Light intensity 50%35.251
SRR6706288Light intensity 20%35.588
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.161
CNS0095593Slightly white alabastrum(diploid) 227.137
CNS0095594Slightly white alabastrum(diploid) 324.820
CNS0095595Whole white alabastrum(diploid) 228.652
CNS0095596Whole white alabastrum(diploid) 322.107
CNS0095597Whole white alabastrum(diploid) 421.080
CNS0095598Silvery flower (diploied) 130.751
CNS0095599Silvery flower (diploied) 221.939
CNS0095600Silvery flower (diploied) 337.794
CNS0095601Golden flower (diploid) 127.424
CNS0095602Golden flower (diploid) 233.808
CNS0095603Golden flower (diploid) 333.846
CNS0095604Slightly white alabastrum(tetraploid) 133.191
CNS0095605Slightly white alabastrum(tetraploid) 229.293
CNS0095606Slightly white alabastrum(tetraploid) 352.149
CNS0095607Whole white alabastrum(tetraploid) 125.992
CNS0095608Whole white alabastrum(tetraploid) 222.268
CNS0095609Whole white alabastrum(tetraploid) 338.614
CNS0095610Silvery flower (tetraploid) 133.339
CNS0095611Silvery flower (tetraploid) 236.246
CNS0095612Silvery flower (tetraploid) 329.403
CNS0095613Golden flower (tetraploid) 120.896
CNS0095614Golden flower (tetraploid) 228.801
CNS0095615Golden flower (tetraploid) 328.113
CRA001975CRR073297Stem 139.034
CRR073298Stem 234.936
CRR073299Stem 346.477
CRR073300Leaf 138.037
CRR073301Leaf 232.317
CRR073302Leaf 335.124
CRR073303Juvenile bud 134.750
CRR073304Juvenile bud 231.007
CRR073305Juvenile bud 333.651
CRR073306Third green 113.047
CRR073307Third green 211.652
CRR073308Third green 318.155
CRR073309Second white 118.892
CRR073310Second white 222.089
CRR073311Second white 320.484
CRR073312Silver flowering 115.695
CRR073313Silver flowering 213.325
CRR073314Silver flowering 316.490
CRR073315Gold flowering 121.576
CRR073316Gold flowering 229.296
CRR073317Gold flowering 318.519
CRR073318Tawny withering 139.367
CRR073319Tawny withering 237.459
CRR073320Tawny withering 341.817