Detail information of GWHGAAZE012071


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002284547.11.9862E-113PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Vitis vinifera]
trEMBLtr|F6H8I1|F6H8I1_VITVI7E-114Putative uncharacterized protein {ECO:0000313|EMBL:CCB48524.1}
TAIR10AT4G14430.15E-79indole-3-butyric acid response 10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7967228179673302+
GWHAAZE00000003mRNA7967228179673302+
GWHAAZE00000003exon7967228179672689+
GWHAAZE00000003exon7967299879673302+
GWHAAZE00000003CDS7967228179672689+
GWHAAZE00000003CDS7967299879673302+
Transcript Sequence

Network for GWHGAAZE012071

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.21ECH_1102021.80E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07517ECI1_2 Fatty acid degradation map00071

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.614
SRR3591706second leaf13.559
SRR3591707mature leaf45.090
SRR3591708Shoot apex16.450
SRR3591709Stem12.664
SRR3591710White floral bud10.741
SRR3591711White flower6.613
SRR3591712Green floral bud15.248
SRR3591713Yellow flower3.325
SRP173429 SRR8316895Juvenile bud stage 5.015
SRR8316896Juvenile bud stage 11.426
SRR8316897Juvenile bud stage 6.364
SRR8316894Third green stage 3.467
SRR8316900Third green stage 7.666
SRR8316901Third green stage 10.676
SRR8316898Complete white stage 0.060
SRR8316899Complete white stage 3.043
SRR8316903Complete white stage 1.785
SRR8316902Silver flowering stage0.064
SRR8316904Silver flowering stage0.026
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.350
SRR8316907Gold flowering stage 1.037
SRR8316908Gold flowering stage 0.728
SRP132670SRR6706286Control4.422
SRR6706287Light intensity 50%4.147
SRR6706288Light intensity 20%3.713
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.606
CNS0095593Slightly white alabastrum(diploid) 26.246
CNS0095594Slightly white alabastrum(diploid) 315.737
CNS0095595Whole white alabastrum(diploid) 210.950
CNS0095596Whole white alabastrum(diploid) 313.818
CNS0095597Whole white alabastrum(diploid) 412.963
CNS0095598Silvery flower (diploied) 16.342
CNS0095599Silvery flower (diploied) 23.063
CNS0095600Silvery flower (diploied) 31.641
CNS0095601Golden flower (diploid) 15.737
CNS0095602Golden flower (diploid) 26.467
CNS0095603Golden flower (diploid) 35.719
CNS0095604Slightly white alabastrum(tetraploid) 114.256
CNS0095605Slightly white alabastrum(tetraploid) 216.776
CNS0095606Slightly white alabastrum(tetraploid) 35.573
CNS0095607Whole white alabastrum(tetraploid) 118.553
CNS0095608Whole white alabastrum(tetraploid) 213.211
CNS0095609Whole white alabastrum(tetraploid) 37.227
CNS0095610Silvery flower (tetraploid) 11.192
CNS0095611Silvery flower (tetraploid) 24.656
CNS0095612Silvery flower (tetraploid) 30.796
CNS0095613Golden flower (tetraploid) 14.021
CNS0095614Golden flower (tetraploid) 23.301
CNS0095615Golden flower (tetraploid) 32.263
CRA001975CRR073297Stem 14.840
CRR073298Stem 25.501
CRR073299Stem 38.313
CRR073300Leaf 14.440
CRR073301Leaf 25.178
CRR073302Leaf 33.581
CRR073303Juvenile bud 12.568
CRR073304Juvenile bud 22.711
CRR073305Juvenile bud 30.448
CRR073306Third green 11.303
CRR073307Third green 21.729
CRR073308Third green 31.610
CRR073309Second white 10.000
CRR073310Second white 20.305
CRR073311Second white 30.272
CRR073312Silver flowering 10.055
CRR073313Silver flowering 21.177
CRR073314Silver flowering 30.210
CRR073315Gold flowering 120.465
CRR073316Gold flowering 220.050
CRR073317Gold flowering 314.853
CRR073318Tawny withering 177.445
CRR073319Tawny withering 250.788
CRR073320Tawny withering 366.966