Detail information of GWHGAAZE012070


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002284507.10PREDICTED: ethylene receptor 2-like [Vitis vinifera]
Swissprottr|Q0WPQ2|ETR2_ARATH0Ethylene receptor 2
trEMBLtr|F6H8H3|F6H8H3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB48516.1}
TAIR10AT3G23150.10Signal transduction histidine kinase, hybrid-type, ethylene sensor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7962116779624075+
GWHAAZE00000003mRNA7962116779624075+
GWHAAZE00000003exon7962116779622927+
GWHAAZE00000003exon7962353379624075+
GWHAAZE00000003CDS7962116779622927+
GWHAAZE00000003CDS7962353379624075+
Transcript Sequence

Network for GWHGAAZE012070

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01590.27GAF1843334.00E-14
PF00512.26HisKA3734332.20E-06
PF00072.25Response_reg6437505.60E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
K14509ETR, ERS MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0007165biological_processsignal transduction
GO:0000160biological_processphosphorelay signal transduction system
GO:0009723biological_processresponse to ethylene
GO:0005789cellular_componentendoplasmic reticulum membrane
GO:0005515molecular_functionprotein binding
GO:0000155molecular_functionphosphorelay sensor kinase activity
GO:0004672molecular_functionprotein kinase activity
GO:0038199molecular_functionethylene receptor activity
GO:0051740molecular_functionethylene binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf91.333
SRR3591706second leaf16.584
SRR3591707mature leaf20.140
SRR3591708Shoot apex31.465
SRR3591709Stem151.767
SRR3591710White floral bud7.169
SRR3591711White flower18.601
SRR3591712Green floral bud2.557
SRR3591713Yellow flower2.732
SRP173429 SRR8316895Juvenile bud stage 1.483
SRR8316896Juvenile bud stage 1.365
SRR8316897Juvenile bud stage 0.729
SRR8316894Third green stage 0.979
SRR8316900Third green stage 1.811
SRR8316901Third green stage 2.017
SRR8316898Complete white stage 1.296
SRR8316899Complete white stage 5.986
SRR8316903Complete white stage 2.092
SRR8316902Silver flowering stage1.480
SRR8316904Silver flowering stage2.206
SRR8316905Silver flowering stage1.010
SRR8316906Gold flowering stage 2.247
SRR8316907Gold flowering stage 1.999
SRR8316908Gold flowering stage 3.684
SRP132670SRR6706286Control2.537
SRR6706287Light intensity 50%2.853
SRR6706288Light intensity 20%2.846
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.302
CNS0095593Slightly white alabastrum(diploid) 22.505
CNS0095594Slightly white alabastrum(diploid) 31.817
CNS0095595Whole white alabastrum(diploid) 22.324
CNS0095596Whole white alabastrum(diploid) 31.370
CNS0095597Whole white alabastrum(diploid) 41.887
CNS0095598Silvery flower (diploied) 17.847
CNS0095599Silvery flower (diploied) 24.912
CNS0095600Silvery flower (diploied) 34.259
CNS0095601Golden flower (diploid) 15.276
CNS0095602Golden flower (diploid) 26.110
CNS0095603Golden flower (diploid) 35.748
CNS0095604Slightly white alabastrum(tetraploid) 12.409
CNS0095605Slightly white alabastrum(tetraploid) 21.658
CNS0095606Slightly white alabastrum(tetraploid) 34.793
CNS0095607Whole white alabastrum(tetraploid) 12.153
CNS0095608Whole white alabastrum(tetraploid) 20.547
CNS0095609Whole white alabastrum(tetraploid) 31.548
CNS0095610Silvery flower (tetraploid) 14.613
CNS0095611Silvery flower (tetraploid) 23.577
CNS0095612Silvery flower (tetraploid) 34.153
CNS0095613Golden flower (tetraploid) 12.611
CNS0095614Golden flower (tetraploid) 24.891
CNS0095615Golden flower (tetraploid) 32.263
CRA001975CRR073297Stem 17.931
CRR073298Stem 28.693
CRR073299Stem 36.520
CRR073300Leaf 111.601
CRR073301Leaf 27.535
CRR073302Leaf 37.193
CRR073303Juvenile bud 113.202
CRR073304Juvenile bud 29.465
CRR073305Juvenile bud 313.400
CRR073306Third green 14.705
CRR073307Third green 24.978
CRR073308Third green 35.820
CRR073309Second white 13.528
CRR073310Second white 24.681
CRR073311Second white 34.304
CRR073312Silver flowering 12.622
CRR073313Silver flowering 22.221
CRR073314Silver flowering 33.066
CRR073315Gold flowering 15.521
CRR073316Gold flowering 29.528
CRR073317Gold flowering 37.298
CRR073318Tawny withering 141.353
CRR073319Tawny withering 236.057
CRR073320Tawny withering 346.563