Detail information of GWHGAAZE012065


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007150516.12.01092E-33hypothetical protein PHAVU_005G158900g [Phaseolus vulgaris]
Swissprottr|O23304|BLUS1_ARATH3E-31Serine/threonine-protein kinase BLUS1
trEMBLtr|V7BZN2|V7BZN2_PHAVU8E-34Uncharacterized protein {ECO:0000313|EMBL:ESW22510.1}
TAIR10AT4G14480.13E-20Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7949608979496334+
GWHAAZE00000003mRNA7949608979496334+
GWHAAZE00000003exon7949608979496334+
GWHAAZE00000003CDS7949608979496334+
Transcript Sequence

Network for GWHGAAZE012065

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE20-Fray

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE012065.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30123456789101112131415Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.884
SRR3591706second leaf6.723
SRR3591707mature leaf10.028
SRR3591708Shoot apex8.423
SRR3591709Stem1.263
SRR3591710White floral bud2.154
SRR3591711White flower1.641
SRR3591712Green floral bud2.396
SRR3591713Yellow flower2.391
SRP173429 SRR8316895Juvenile bud stage 6.986
SRR8316896Juvenile bud stage 8.228
SRR8316897Juvenile bud stage 2.478
SRR8316894Third green stage 3.010
SRR8316900Third green stage 5.853
SRR8316901Third green stage 7.292
SRR8316898Complete white stage 0.882
SRR8316899Complete white stage 4.637
SRR8316903Complete white stage 1.842
SRR8316902Silver flowering stage0.592
SRR8316904Silver flowering stage1.762
SRR8316905Silver flowering stage0.459
SRR8316906Gold flowering stage 3.488
SRR8316907Gold flowering stage 1.850
SRR8316908Gold flowering stage 13.560
SRP132670SRR6706286Control4.051
SRR6706287Light intensity 50%4.345
SRR6706288Light intensity 20%5.127
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.821
CNS0095593Slightly white alabastrum(diploid) 21.947
CNS0095594Slightly white alabastrum(diploid) 32.337
CNS0095595Whole white alabastrum(diploid) 21.064
CNS0095596Whole white alabastrum(diploid) 32.186
CNS0095597Whole white alabastrum(diploid) 40.622
CNS0095598Silvery flower (diploied) 13.932
CNS0095599Silvery flower (diploied) 20.925
CNS0095600Silvery flower (diploied) 33.322
CNS0095601Golden flower (diploid) 13.016
CNS0095602Golden flower (diploid) 24.791
CNS0095603Golden flower (diploid) 32.664
CNS0095604Slightly white alabastrum(tetraploid) 15.942
CNS0095605Slightly white alabastrum(tetraploid) 21.878
CNS0095606Slightly white alabastrum(tetraploid) 34.812
CNS0095607Whole white alabastrum(tetraploid) 11.892
CNS0095608Whole white alabastrum(tetraploid) 20.038
CNS0095609Whole white alabastrum(tetraploid) 35.203
CNS0095610Silvery flower (tetraploid) 10.891
CNS0095611Silvery flower (tetraploid) 24.950
CNS0095612Silvery flower (tetraploid) 33.166
CNS0095613Golden flower (tetraploid) 11.027
CNS0095614Golden flower (tetraploid) 21.103
CNS0095615Golden flower (tetraploid) 30.659
CRA001975CRR073297Stem 16.359
CRR073298Stem 27.333
CRR073299Stem 32.199
CRR073300Leaf 17.462
CRR073301Leaf 25.340
CRR073302Leaf 32.504
CRR073303Juvenile bud 12.235
CRR073304Juvenile bud 20.558
CRR073305Juvenile bud 31.787
CRR073306Third green 10.716
CRR073307Third green 20.401
CRR073308Third green 30.885
CRR073309Second white 10.621
CRR073310Second white 22.410
CRR073311Second white 31.794
CRR073312Silver flowering 11.766
CRR073313Silver flowering 23.309
CRR073314Silver flowering 30.370
CRR073315Gold flowering 111.652
CRR073316Gold flowering 210.625
CRR073317Gold flowering 310.506
CRR073318Tawny withering 12.072
CRR073319Tawny withering 24.134
CRR073320Tawny withering 32.602