Detail information of GWHGAAZE012020


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO99148.18.85997E-65unnamed protein product [Coffea canephora]
Swissprottr|Q38832|IAA14_ARATH1E-57Auxin-responsive protein IAA14
trEMBLtr|A0A068TUY9|A0A068TUY9_COFCA3E-65Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT4G14550.19E-47indole-3-acetic acid inducible 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7864872978651600+
GWHAAZE00000003mRNA7864872978651600+
GWHAAZE00000003exon7864872978648797+
GWHAAZE00000003exon7864977678649969+
GWHAAZE00000003exon7865112178651189+
GWHAAZE00000003exon7865127278651333+
GWHAAZE00000003exon7865156378651600+
GWHAAZE00000003CDS7864872978648797+
GWHAAZE00000003CDS7864977678649969+
GWHAAZE00000003CDS7865112178651189+
GWHAAZE00000003CDS7865127278651333+
GWHAAZE00000003CDS7865156378651600+
Transcript Sequence

Network for GWHGAAZE012020

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA21876.10E-28
PF02309.17AUX_IAA891341.40E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf182.296
SRR3591706second leaf64.654
SRR3591707mature leaf157.983
SRR3591708Shoot apex29.275
SRR3591709Stem103.141
SRR3591710White floral bud67.365
SRR3591711White flower224.288
SRR3591712Green floral bud5.440
SRR3591713Yellow flower64.820
SRP173429 SRR8316895Juvenile bud stage 4.111
SRR8316896Juvenile bud stage 4.008
SRR8316897Juvenile bud stage 6.681
SRR8316894Third green stage 1.958
SRR8316900Third green stage 2.190
SRR8316901Third green stage 4.484
SRR8316898Complete white stage 22.821
SRR8316899Complete white stage 11.756
SRR8316903Complete white stage 31.609
SRR8316902Silver flowering stage219.700
SRR8316904Silver flowering stage274.703
SRR8316905Silver flowering stage193.657
SRR8316906Gold flowering stage 483.784
SRR8316907Gold flowering stage 359.950
SRR8316908Gold flowering stage 518.035
SRP132670SRR6706286Control6.439
SRR6706287Light intensity 50%8.991
SRR6706288Light intensity 20%6.757
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.321
CNS0095593Slightly white alabastrum(diploid) 26.419
CNS0095594Slightly white alabastrum(diploid) 36.790
CNS0095595Whole white alabastrum(diploid) 23.334
CNS0095596Whole white alabastrum(diploid) 33.879
CNS0095597Whole white alabastrum(diploid) 45.070
CNS0095598Silvery flower (diploied) 141.201
CNS0095599Silvery flower (diploied) 256.574
CNS0095600Silvery flower (diploied) 3160.307
CNS0095601Golden flower (diploid) 154.600
CNS0095602Golden flower (diploid) 269.178
CNS0095603Golden flower (diploid) 368.124
CNS0095604Slightly white alabastrum(tetraploid) 110.874
CNS0095605Slightly white alabastrum(tetraploid) 213.762
CNS0095606Slightly white alabastrum(tetraploid) 326.395
CNS0095607Whole white alabastrum(tetraploid) 16.136
CNS0095608Whole white alabastrum(tetraploid) 26.947
CNS0095609Whole white alabastrum(tetraploid) 39.230
CNS0095610Silvery flower (tetraploid) 1261.958
CNS0095611Silvery flower (tetraploid) 2314.454
CNS0095612Silvery flower (tetraploid) 3277.626
CNS0095613Golden flower (tetraploid) 1168.920
CNS0095614Golden flower (tetraploid) 2139.710
CNS0095615Golden flower (tetraploid) 3176.211
CRA001975CRR073297Stem 18.608
CRR073298Stem 28.941
CRR073299Stem 38.104
CRR073300Leaf 17.670
CRR073301Leaf 28.120
CRR073302Leaf 35.830
CRR073303Juvenile bud 110.476
CRR073304Juvenile bud 215.115
CRR073305Juvenile bud 35.488
CRR073306Third green 1870.204
CRR073307Third green 2716.193
CRR073308Third green 3758.640
CRR073309Second white 1519.208
CRR073310Second white 2993.687
CRR073311Second white 3505.640
CRR073312Silver flowering 1170.017
CRR073313Silver flowering 2115.020
CRR073314Silver flowering 3125.895
CRR073315Gold flowering 1107.292
CRR073316Gold flowering 268.006
CRR073317Gold flowering 353.294
CRR073318Tawny withering 13.027
CRR073319Tawny withering 22.792
CRR073320Tawny withering 31.626