Gene detail

Detail information of GWHGAAZE011903

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44220.1	1.2438E-102	hypothetical protein MIMGU_mgv1a003782mg [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	5E-100	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ18\|A0A022RZ18_ERYGU	5E-103	Uncharacterized protein {ECO:0000313\|EMBL:EYU44220.1}
TAIR10	AT3G51550.1	5E-89	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	75103050	75105308	+
GWHAAZE00000003	mRNA	75103050	75105308	+
GWHAAZE00000003	exon	75103050	75104124	+
GWHAAZE00000003	exon	75104782	75105308	+
GWHAAZE00000003	CDS	75103050	75104124	+
GWHAAZE00000003	CDS	75104782	75105308	+

Transcript Sequence
>GWHTAAZE011915 ATGATGGTGCCGCCGCGGTTAGTACCAGTGGAGAAATTATGCCGCCCCTTCTCGTTCGTTGAGATCTTATCCGCTACTCACAACTTTGACGATTCATTGCTCATCGGCAAGGGAGGATTTGGGCAAGTATACAAAGGGTTCATTGATGACGGGGCAAACATTGTTGCTATAAAACGGTGGAATTCTACGTCCAAGCAAAGAGAATCCCAATTTACAACCGAGATTGAGATGCTTTCGAAATTCCGTCATTCTCATATTGTGTCTCTAGTCGGTTATTGTTATAATTCTAGTGAGATGATCCTTATTTATGAATATATGAGTAATGGATCTCTCGCAGATCATCTTTACAAAACAAATGATGACGGTAGTACTGGTTGTGCTTTATCTTGGGTGCAACGCCTAAAGATTTGTCTAGGAGCTGCTCGTGGCCTGGATTACCTTCATACAGGTACATGTACTGATGTTCAAGATGGCATCATACATCGTGACGTGAAGAGTTCAAACATTTTGTTAGATAAGCATTGGGTAGCTAGAGTTTCAGACTTCGGGCTCTCTAAAACAAACCCAATTAATCACTCATGTGTGCATACCAAGGTTGGAGGCACCATAGGGTACATGGATCCAGAATATGCATTGACCCAAAGATTGAGAATGAACTCCGACATTTACTCTTTTGGGGTTGTCTTGTTCGAAGTGCTGTGTGGAAGGAGAGTGAGAGATTACACACCGGATGACGAGCAATGGGATCTTGCAGAATGGGTATCACGCCGCGTTGAAGAAGGAACACTGCATCAACTCATCGATCGTAATTTGAGGTGGGAAATTTTGCCAAATTCTTTGAATAAGTTTGTGGAAATTGCATGTCAATGCTTGTGTTACTACTCAAAAAAACGCCCTACAATGACTCAAGTTGTGGCCTCACTTGAGTTGGCATTGGCGTTACAACTGATGCACGACTCTTCTATCTTGACAATGGAGATCTTTGAAAACAAGGATAACGTCGATTCTAGTATTGTGCAACAAGAAGCTATCAAAATCTGCAATTACGTAAAGCCTACCAAGAGAAATACATTAGGGATAAAACTGGCAAATGTGAAAAGATTTTTCCAAAAATTTGATGCCAACCAAGACAGTGGTATCAACAAAGAAGAAAAGGTGACAATAATCAACAAAATATGCGATGCTAACCAAGACAGCTGTCTCAACAAAAAAGTGGTGACTATATGCAACGACATATTTGATACCAACCGAGACTGCACTCTCAACAAAAAAATGTTGATGAGTATTTCCAACAAATTTGCAAAGGCCGATATAATTTTCCGAAATTTCGACACCAATCGAGACAATTTCCTCAGCGCAGAAGAAATAAGAGTCTTGGTCATCGATCTGTACCTTAAAGTCGAGTTCACCAACGAGCAGCTAAATTCGCTTGTCAACGAATTCTTTCAAAGCTGTAGTTCATATACAGACGGAGAGAAAGGTTTTCTGGGGATTTTCCAAATGTACAACGTGGAAAAAGGTCTCACTTTTTCTGGATTTTGTCAAATGTACGACGACAATGTAAGAGACATTGATCGTGATTTTGCTACACTTTGGCTTTGA

Network for GWHGAAZE011903

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	34	306	9.50E-48

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0005509	molecular_function	calcium ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	22.875
	SRR3591706	second leaf	4.428
	SRR3591707	mature leaf	1.998
	SRR3591708	Shoot apex	8.162
	SRR3591709	Stem	22.409
	SRR3591710	White floral bud	3.790
	SRR3591711	White flower	5.152
	SRR3591712	Green floral bud	2.882
	SRR3591713	Yellow flower	1.737
SRP173429	SRR8316895	Juvenile bud stage	6.330
	SRR8316896	Juvenile bud stage	4.854
	SRR8316897	Juvenile bud stage	2.914
	SRR8316894	Third green stage	2.191
	SRR8316900	Third green stage	2.486
	SRR8316901	Third green stage	3.813
	SRR8316898	Complete white stage	0.579
	SRR8316899	Complete white stage	11.041
	SRR8316903	Complete white stage	1.653
	SRR8316902	Silver flowering stage	0.647
	SRR8316904	Silver flowering stage	0.853
	SRR8316905	Silver flowering stage	0.528
	SRR8316906	Gold flowering stage	2.690
	SRR8316907	Gold flowering stage	1.297
	SRR8316908	Gold flowering stage	2.486
SRP132670	SRR6706286	Control	2.768
	SRR6706287	Light intensity 50%	2.722
	SRR6706288	Light intensity 20%	2.592
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	5.156
	CNS0095593	Slightly white alabastrum(diploid) 2	4.353
	CNS0095594	Slightly white alabastrum(diploid) 3	5.004
	CNS0095595	Whole white alabastrum(diploid) 2	4.001
	CNS0095596	Whole white alabastrum(diploid) 3	1.276
	CNS0095597	Whole white alabastrum(diploid) 4	3.511
	CNS0095598	Silvery flower (diploied) 1	9.547
	CNS0095599	Silvery flower (diploied) 2	5.400
	CNS0095600	Silvery flower (diploied) 3	4.692
	CNS0095601	Golden flower (diploid) 1	12.761
	CNS0095602	Golden flower (diploid) 2	6.671
	CNS0095603	Golden flower (diploid) 3	7.374
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.262
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.297
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.442
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.064
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.265
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.182
	CNS0095610	Silvery flower (tetraploid) 1	0.174
	CNS0095611	Silvery flower (tetraploid) 2	0.085
	CNS0095612	Silvery flower (tetraploid) 3	0.076
	CNS0095613	Golden flower (tetraploid) 1	0.092
	CNS0095614	Golden flower (tetraploid) 2	0.054
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	2.925
	CRR073298	Stem 2	3.354
	CRR073299	Stem 3	2.620
	CRR073300	Leaf 1	4.484
	CRR073301	Leaf 2	5.696
	CRR073302	Leaf 3	4.493
	CRR073303	Juvenile bud 1	2.077
	CRR073304	Juvenile bud 2	1.275
	CRR073305	Juvenile bud 3	5.779
	CRR073306	Third green 1	0.785
	CRR073307	Third green 2	0.929
	CRR073308	Third green 3	1.863
	CRR073309	Second white 1	0.258
	CRR073310	Second white 2	0.734
	CRR073311	Second white 3	1.499
	CRR073312	Silver flowering 1	0.764
	CRR073313	Silver flowering 2	0.840
	CRR073314	Silver flowering 3	0.539
	CRR073315	Gold flowering 1	1.125
	CRR073316	Gold flowering 2	2.131
	CRR073317	Gold flowering 3	1.371
	CRR073318	Tawny withering 1	7.197
	CRR073319	Tawny withering 2	9.999
	CRR073320	Tawny withering 3	16.582