Gene detail

Detail information of GWHGAAZE011889

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44215.1	3.9378E-122	hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-105	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	1E-122	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT3G51550.1	4E-94	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74804849	74807887	-
GWHAAZE00000003	mRNA	74804849	74807887	-
GWHAAZE00000003	exon	74804849	74805142	-
GWHAAZE00000003	exon	74805476	74805930	-
GWHAAZE00000003	exon	74806693	74807887	-
GWHAAZE00000003	CDS	74806693	74807887	-
GWHAAZE00000003	CDS	74805476	74805930	-
GWHAAZE00000003	CDS	74804849	74805142	-

Transcript Sequence
>GWHTAAZE011901 ATGATGCCGATACCAGTTCCGCCACTGCCGGAGCACTTAAACAGGCTGCCGTTGGATCCGCCGGAGCCATTTTGCCATCCCTTCTCCCTTGCTGAGATCTTATCCGGGACTCACAACTTTGACGAGTCATTGGTTATCGGGCATGGCGGATTCGGTAAAGTATACAAAGGGGTCATTGACAACGAGACAAGTGTTGTTGCTGTAAAAAGGCTGAGTTCCACTTCCAAGCAAGGAGATTCTGAATTCAGAACCGAGATTGAAATGCTTTCAAAATTTCGACACACTCATATTGTGTCTCTGATCGGTTATTGTTACAGTTCTACTGAGATGGTACTTGTTTATGAATATATGGTCAACGGGTCTCTCGCAGATCATTTGTACAAAACTGGCAAGTATTGTGGTGGTCCTGCTTTATCTTGGGTGCAACGTCTCAAGATTTGTCTGGGAGCTGCTCGTGGCTTGGACTACCTCCATACAGGTACCGGTGTCATACATCGTGACGTTAAGAGTTCGAACATCCTGTTAGACAAAAATTGTGCAGCTAAAGTTTCAGACTTCGGGTTGTCTAGAATAAGCCCAATTGATCAGTCATGCACTCATATCAGCACAAATGTTAAAGGGACAACGGGGTACATGGATCCAGAATATCTGTTGACCCTCAAATTGACCATGAAATCTGATGTCTACTCTTTTGGGGTTGTATTATTTGAAGTGTTGTGTGGAAGGCAAGCGGTGGATTTAAGGCTTGATGATGAGCAATGGAGTCTTGCTAGGTGGGCCCAACACTGTATTGAAAAAGGAACACTTCATCAGATTATTGATCCTAATTTGAGGTGGGAAATTTTGCCCGAGTCTTATACAGAATTTGCACGAATTGCAAATCAATGCTTATGTTATCAGTCGAAAAAACGTCCTACGATGACTCAAGTCGTGGCGTCACTCGAGTTAGCCTTGGCATTGCAATTAGGACATAAAGATACTTCTGCATTTGAAATGGAGTTAGTTTGTACAAGTGAGGTGCCTGAAAACATAGAGAAGGTTGATTCAAAAATGGTGCAAGAAATGGCTATCAAATTTGGGAGTTGTGATGAGCATAATAAAGATATCCTGCGGTCTCACGTGAAGCCTACCAAAAGAAAGGCACTCAGAAAAATGTTGCAATTGTTTATGTTTCGCACAGTTCGTGAGGCACCAGATGGCAGAACTCAAGAAGGTCCAGGCGCCAAATTAAGGAGCGGCACCTCAAAAACACATATAGATAGGCCTGAAGAATTCTTGTTTTCGGACCTTGCTGCGGCCACCAACAATTTCTCCTTGGAGAACAAGATTGGTGCCGGTAGCTTTGGGAAAGTGTACAAAGGCAAACTACTAGATGGACGAGAGGTCGCTATTAAAAGGGGAGAGATTGCCAGTTCAAAGATGAAGAAATTTCTTCGAGAGAAAGAGAGCAGCAGCGCGTTTGATTCAGAATTGGCTTCCTTATCTAGGGTTCACCACAAAAACCTGGTTAGGCTAGTTGGGTTTTGCGAATCAGGGAGGGACGAGGAGAGGCTCTTAGTTTATGAATACATGAAAAATGAAGCACTTTTCCATCATTTGCACGACAAGAACAACATGGAAAAGAGTAGCAGTCCCTTAAATTCTTGGAAGAATGGGGAAGATGGTGTTCCAACTAATGTAGTGGATTTTGCAGTACCAGCCATTATAGCCGGAGAATTGCCCAAGGTTTTGGACCCGAGGGTTGGATCGCAGCTGGAGGAGAATGAAGCAGAGGCAGTAGAGCTAGTTGCTTATACCGCAATTCACTGTGTGAATTTGGAAGGGAGAGAGAGACCTACCATGGCTGACATTGTGGCGAATTTGGAGCGAGCATTGGCTTTTTGTGCTGATAATAGCCATGGCAGCAGCATCTCTAGTGGCACAATCTCCATGGATTCAGATTAA

Network for GWHGAAZE011889

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	44	312	4.20E-52
PF00069.26	Pkinase	438	541	2.90E-14

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.483
	SRR3591706	second leaf	0.468
	SRR3591707	mature leaf	0.560
	SRR3591708	Shoot apex	0.949
	SRR3591709	Stem	4.595
	SRR3591710	White floral bud	4.261
	SRR3591711	White flower	6.232
	SRR3591712	Green floral bud	1.984
	SRR3591713	Yellow flower	3.065
SRP173429	SRR8316895	Juvenile bud stage	2.149
	SRR8316896	Juvenile bud stage	1.194
	SRR8316897	Juvenile bud stage	1.607
	SRR8316894	Third green stage	0.625
	SRR8316900	Third green stage	0.524
	SRR8316901	Third green stage	0.826
	SRR8316898	Complete white stage	0.145
	SRR8316899	Complete white stage	1.778
	SRR8316903	Complete white stage	0.156
	SRR8316902	Silver flowering stage	0.179
	SRR8316904	Silver flowering stage	0.259
	SRR8316905	Silver flowering stage	0.110
	SRR8316906	Gold flowering stage	0.516
	SRR8316907	Gold flowering stage	0.237
	SRR8316908	Gold flowering stage	0.560
SRP132670	SRR6706286	Control	0.673
	SRR6706287	Light intensity 50%	0.742
	SRR6706288	Light intensity 20%	0.680
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.422
	CNS0095593	Slightly white alabastrum(diploid) 2	1.725
	CNS0095594	Slightly white alabastrum(diploid) 3	1.756
	CNS0095595	Whole white alabastrum(diploid) 2	1.640
	CNS0095596	Whole white alabastrum(diploid) 3	0.082
	CNS0095597	Whole white alabastrum(diploid) 4	1.140
	CNS0095598	Silvery flower (diploied) 1	4.671
	CNS0095599	Silvery flower (diploied) 2	3.891
	CNS0095600	Silvery flower (diploied) 3	2.008
	CNS0095601	Golden flower (diploid) 1	5.555
	CNS0095602	Golden flower (diploid) 2	3.669
	CNS0095603	Golden flower (diploid) 3	4.151
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.138
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.171
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.369
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.267
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.199
	CNS0095610	Silvery flower (tetraploid) 1	0.353
	CNS0095611	Silvery flower (tetraploid) 2	0.119
	CNS0095612	Silvery flower (tetraploid) 3	0.471
	CNS0095613	Golden flower (tetraploid) 1	0.234
	CNS0095614	Golden flower (tetraploid) 2	0.348
	CNS0095615	Golden flower (tetraploid) 3	0.209
CRA001975	CRR073297	Stem 1	0.460
	CRR073298	Stem 2	0.549
	CRR073299	Stem 3	0.192
	CRR073300	Leaf 1	0.454
	CRR073301	Leaf 2	0.623
	CRR073302	Leaf 3	0.386
	CRR073303	Juvenile bud 1	0.164
	CRR073304	Juvenile bud 2	0.323
	CRR073305	Juvenile bud 3	0.556
	CRR073306	Third green 1	0.012
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.101
	CRR073309	Second white 1	0.020
	CRR073310	Second white 2	0.004
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.021
	CRR073313	Silver flowering 2	0.099
	CRR073314	Silver flowering 3	0.186
	CRR073315	Gold flowering 1	1.686
	CRR073316	Gold flowering 2	2.409
	CRR073317	Gold flowering 3	1.239
	CRR073318	Tawny withering 1	3.516
	CRR073319	Tawny withering 2	5.695
	CRR073320	Tawny withering 3	5.247