Gene detail

Detail information of GWHGAAZE011883

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU38035.1	7.0842E-113	hypothetical protein MIMGU_mgv1a004344mg [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	3E-103	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RGN2\|A0A022RGN2_ERYGU	3E-113	Uncharacterized protein {ECO:0000313\|EMBL:EYU38035.1}
TAIR10	AT3G51550.1	6E-91	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74671269	74673830	-
GWHAAZE00000003	mRNA	74671269	74673830	-
GWHAAZE00000003	exon	74671269	74671996	-
GWHAAZE00000003	exon	74672729	74673830	-
GWHAAZE00000003	CDS	74672729	74673830	-
GWHAAZE00000003	CDS	74671269	74671996	-

Transcript Sequence
>GWHTAAZE011895 ATGGCTGTACCGGTAACACCACTGCCGGAGCACTTCAACACCCTGCCTTTGCCTTTGCCTTTGCCGGAGCAATTATGCCGTCCTTTCTCCTTTGCTGAGATCTTATCCGCAACTAACAACTTCGACGATTCATTGGTTATTGGGGAAGGCGGATTTGGTAAAGTATACAAAGGGGTCATTGACAACGGGGCAAGTATCATTGCTATAAAACGGCTAAGCTCTGCGTCTAAGCAAGGAGATTCCGAATTCAGAACCGAGATTGAGTTGCTCTCAAAACTCCGGCACTTTCATATTGTGTCTTTAATTGGTTACTGTTATATTTCCACTGAGATGATCCTTGTCTATGAGCATATGGACAACGGGTCTCTAGCAGATCACTTGCACAAAATTGGCAAGTATGGTACTAGTTCTAATTTATCTTGGGTGCAGCGTCTCAAGATTTGTCTAGGAGCTGCTCGTGGCTTGGATTACCTCCATACAGGTACTGGTGTCATACATCGGGATATGAAGAGTTCGAACATCCTGTTAGATAAGAATTGCGCAGCTAAAGTTTCAGACTTTGGTTTGTCTAGAATCAACCCAATTGATCAGTCTTACACTCATATCACCACAAATGTAAAAGGGACAACGGGGTATTTGGATCCAGAATATATGGTGACCTTCCGATTGACAATGAAATCCGATGTCTACTCTTTTGGGGTTGTACTATTTGAAGTGTTGTGCGGAAGGCGAGCAGTGGATTTTACACTTGATGAAGAGCAATGGAGTCTTGCTAGGTGGGCCCAATGCTGCGTTGAAAAAGGAACGCTTCATCGTATTATCAATCCTAATTTGTGGTCGGAAATCTTGCCGGAATCTTTGAAAGAGTTTGTACGAATTGCAAATCAATGCTTACGTTATCGGCCGAAAAAACGACCTACAATGACTCAGGTCGTGAGCTCTCTCGAGTTGGCGTTGGCATTGCAGCTAGGACACAAAGATTCTTCTGCGTTTGAAATGGAAATTATTTATACAACTGAGGCAGATGAAATCATAGAAAATGTTGACTCAACAATGGTACAAGAAGAAAGGCAATCGTTTATGTTATCTGACGACGCATCAGTTCCTGAAGAGGCTTCTTCTTCCTCCTCCTCCGAGCCTGCAATTGATGATCCATTACCTGAAGTAGAAGGCCTCCAAATTTCCGGTGAACCTTTTCCTGGACAGGAGCTGCAAGCAAGCGGATTTTCTACTAATGGAACAAGAAGTTGTAATTTTGAGTGGGTGCGACATTTTGAAGATGGCTCTGTTGCGTACGTAGATGGGGCAAACAAACCAAGCTATCTTGTTAGCGCGGATGATGTTGATACATTCCTTGCCGTTGAAGTTCAGCCGATGGATGACAGAAAGCGAAAGGGGGAAGTCTCAAAGGCCTTCACCAATAGGAAGATCACTTGTCATTCAGAATTGGAAAACCACATAGCGAGGAACCTTTACATTGGCCATGCTATGTATAGGGTAACCTTGTCTATGAGATATATTGCGACCGCTATATGGGAGCCAGCTACTTTGGCGATCAAGCGGGAAGGTTTTATCATCAAGCTTACTGGACGTAGTGCTGTTATAGTCGCTGAGAAATTCTCACCATCCACAATAGTTACAATTACATGTGGAAATCCTGATGAATTCTCAATAATTGGTAATGCTAAGCATGTTTTGCGAGCAAATGAAAGCTCACGGCAAGATATAAGCTGTTTAAGAGATGCAATTGTTCTCACCATGAGATTATTTGTCATGAGGGCTGGTGAGAATAAGAAAGGGAAGGAGAGAGGTTTATTCTTTAACAAGTAG

Network for GWHGAAZE011883

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	46	313	5.60E-50

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	66.279
	SRR3591706	second leaf	5.426
	SRR3591707	mature leaf	3.593
	SRR3591708	Shoot apex	19.417
	SRR3591709	Stem	33.866
	SRR3591710	White floral bud	6.307
	SRR3591711	White flower	6.069
	SRR3591712	Green floral bud	5.328
	SRR3591713	Yellow flower	1.550
SRP173429	SRR8316895	Juvenile bud stage	51.427
	SRR8316896	Juvenile bud stage	38.453
	SRR8316897	Juvenile bud stage	11.455
	SRR8316894	Third green stage	11.754
	SRR8316900	Third green stage	22.801
	SRR8316901	Third green stage	36.520
	SRR8316898	Complete white stage	0.504
	SRR8316899	Complete white stage	68.768
	SRR8316903	Complete white stage	1.016
	SRR8316902	Silver flowering stage	0.735
	SRR8316904	Silver flowering stage	0.164
	SRR8316905	Silver flowering stage	0.150
	SRR8316906	Gold flowering stage	1.163
	SRR8316907	Gold flowering stage	0.733
	SRR8316908	Gold flowering stage	0.146
SRP132670	SRR6706286	Control	4.166
	SRR6706287	Light intensity 50%	5.294
	SRR6706288	Light intensity 20%	4.344
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	21.701
	CNS0095593	Slightly white alabastrum(diploid) 2	35.403
	CNS0095594	Slightly white alabastrum(diploid) 3	26.157
	CNS0095595	Whole white alabastrum(diploid) 2	23.930
	CNS0095596	Whole white alabastrum(diploid) 3	3.459
	CNS0095597	Whole white alabastrum(diploid) 4	18.528
	CNS0095598	Silvery flower (diploied) 1	53.762
	CNS0095599	Silvery flower (diploied) 2	51.177
	CNS0095600	Silvery flower (diploied) 3	22.722
	CNS0095601	Golden flower (diploid) 1	49.476
	CNS0095602	Golden flower (diploid) 2	31.487
	CNS0095603	Golden flower (diploid) 3	33.137
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.105
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.460
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.678
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.766
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.144
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.057
	CNS0095610	Silvery flower (tetraploid) 1	0.717
	CNS0095611	Silvery flower (tetraploid) 2	0.907
	CNS0095612	Silvery flower (tetraploid) 3	0.656
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.153
	CNS0095615	Golden flower (tetraploid) 3	0.075
CRA001975	CRR073297	Stem 1	12.802
	CRR073298	Stem 2	18.716
	CRR073299	Stem 3	16.325
	CRR073300	Leaf 1	38.529
	CRR073301	Leaf 2	44.378
	CRR073302	Leaf 3	17.302
	CRR073303	Juvenile bud 1	21.780
	CRR073304	Juvenile bud 2	18.514
	CRR073305	Juvenile bud 3	51.484
	CRR073306	Third green 1	1.870
	CRR073307	Third green 2	3.065
	CRR073308	Third green 3	2.555
	CRR073309	Second white 1	1.199
	CRR073310	Second white 2	1.842
	CRR073311	Second white 3	0.713
	CRR073312	Silver flowering 1	2.377
	CRR073313	Silver flowering 2	3.140
	CRR073314	Silver flowering 3	2.912
	CRR073315	Gold flowering 1	18.145
	CRR073316	Gold flowering 2	20.660
	CRR073317	Gold flowering 3	20.240
	CRR073318	Tawny withering 1	12.993
	CRR073319	Tawny withering 2	16.571
	CRR073320	Tawny withering 3	19.008