Gene detail

Detail information of GWHGAAZE011875

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44215.1	1.20002E-82	hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-80	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|F6HWQ0\|F6HWQ0_VITVI	7E-86	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB59114.1}
TAIR10	AT3G51550.1	2E-73	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74524008	74530423	+
GWHAAZE00000003	mRNA	74524008	74530423	+
GWHAAZE00000003	exon	74524008	74524342	+
GWHAAZE00000003	exon	74524413	74524786	+
GWHAAZE00000003	exon	74528657	74529421	+
GWHAAZE00000003	exon	74529901	74529984	+
GWHAAZE00000003	exon	74530158	74530183	+
GWHAAZE00000003	exon	74530286	74530423	+
GWHAAZE00000003	CDS	74524008	74524342	+
GWHAAZE00000003	CDS	74524413	74524786	+
GWHAAZE00000003	CDS	74528657	74529421	+
GWHAAZE00000003	CDS	74529901	74529984	+
GWHAAZE00000003	CDS	74530158	74530183	+
GWHAAZE00000003	CDS	74530286	74530423	+

Transcript Sequence
>GWHTAAZE011887 ATGGATTTCTTCCACAACGCCAAGGTCATCCGTCTCCGTAGCCACCACCGCAAGTACCTAACCGCCCCCGAGGAAGAGGAAGAGGAAGAAGAATCCGTCGTCACCCAAGACCTTAACGGCCTCTCCAAAGGCGCCCGGTGGACTGTGGAGTACTTGGACGATGACAACAGCTTAAACATCCGCCTCAGGAGCTGCAACGGCAAATACCTGACTGCCTCCTATAAGGGCTGTAAAGTCCTCCAAACTTTACCTCCTCGTCTTGACTCTTCCGTCGAGTGGAAACCCATCAGCGGAGGCAATCGTGTTCAGCTCTGGACCAGTTATGGCGGTGGCACCTCTCCACATGACTGGAGTCTCTGGGATGTCGATGTCGTTGAGATCGTCGTCCATTCAGCTACATGTGAAAAAGATAAAGGTAACATCCTTCACAACCCAGAGCACCTAACCACGCTGCCGTTGGCTCTGCCGGAGCAACTATGCCGCCCCTTTTCCCTTACCGAGATATTATCGGCAACTAACAACTTTGACGAGTCGCTGGTCATTGGCCAGGGAGGATTCGGAAAAGTATACAAAGGTGTCATAGAGAATGGGGCAAATGTTGTTGCCATAAAACGGCTTGATTCTATGTCCAAGCAAGGAGATACGGAATTTAGAACTGAGATTGAGATGCTTTCAAAATTTCGACACTCTCATATCGTATCTCTAATCGGAGCTGCCCGTGGCTTGGATTACCTCCATACAGGTACCGGTGATCAAGGCAGTGTCATACATCGTGACGTAAAGAGTTCAAATATCTTGTTAGATAAGAATTATGCAGCTAAAGTTTCAGACTTTGGATTGTCAAGAATAAACCCAATTGATCAGTCATGCACTTATATCAACACAAATGTTAAAGGGACAATGGGGTACATGGATCCAGAGTATTTCCTGACTCTCAGACTGACAATGAAATCCGATGTCTACTCTTTTGGGATTGTAATGTTTGAAGCATTGTGTGGAAGGCGAGCAGTAGATTTATCACTTGACGAAGAGCAATGGAGTCTTGCTAGGTGGGCCCAACACTGTATTGACAAAGGAACACTTCACCAGATTATTGATCCTAATTTAAGGTGGGAAATATTGCCAGAGTCTTTGACAGAGTTTGTGCGTATTGCAAATCAATGCTTGTGTTATTATTCAAAAAAATGCCCCACGATGACTCAGGTCATTGGGTCACTTGAGTTAGCGTTAGCATTGCAACTAGGACACAAAGATTCTTCTACATTTGAAATGGAAATTTTTTGTAGAAGTGAGGCAGATGAAAACTTAGAGAAGGTAGATTCAACAACGGTCCAAGATGAAGCTATCAAATTTGGGAGTTATAATGAGGATAGTAAAGATATCCTGCAGTCTCATCATGTAAACCCTACTAAAAGAAAGACACTCACAAATATGTTGCAACCGTTCATGTTTTGCACGGTTCAGGAGGCATCAGAGGAAGACATTCCACCTCGTTTTCTGGACGAAGCGATGTTCTTGAAGGAAAAGCGCGATTTTGTCTCACGACTCCAGAGCTCAAGAACTTCTGGTAGAGACTTGACACAGGGGGAATCTGAATTTGAGGAAAAAGTTGCAATGCTTGTTGGATTAGGTTTTAGGAGGGTGGCGGTGACACTAGCTCTAAAGTTTTTCCATGGTAATGTAGAACAGGCAGCTCTTCATCTCTTTGGCCGCTCAGTATGA

Network for GWHGAAZE011875

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04601.14	DUF569	1	109	1.10E-25
PF00069.26	Pkinase	179	238	5.80E-10
PF00069.26	Pkinase	239	403	4.20E-23
PF00627.32	UBA	534	565	1.50E-05

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005515	molecular_function	protein binding
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.076
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.219
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.279
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.031
	SRR3591713	Yellow flower	0.262
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.019
	SRR8316897	Juvenile bud stage	0.058
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.051
	SRR8316901	Third green stage	0.055
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.119
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.029
	SRR8316904	Silver flowering stage	0.041
	SRR8316905	Silver flowering stage	0.038
	SRR8316906	Gold flowering stage	0.331
	SRR8316907	Gold flowering stage	0.082
	SRR8316908	Gold flowering stage	0.124
SRP132670	SRR6706286	Control	0.076
	SRR6706287	Light intensity 50%	0.011
	SRR6706288	Light intensity 20%	0.041
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.104
	CNS0095596	Whole white alabastrum(diploid) 3	0.013
	CNS0095597	Whole white alabastrum(diploid) 4	0.218
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.017
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.297
	CNS0095603	Golden flower (diploid) 3	0.628
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.080
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.045
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.169
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.064
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.050
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.062
	CNS0095610	Silvery flower (tetraploid) 1	25.630
	CNS0095611	Silvery flower (tetraploid) 2	28.386
	CNS0095612	Silvery flower (tetraploid) 3	17.686
	CNS0095613	Golden flower (tetraploid) 1	52.082
	CNS0095614	Golden flower (tetraploid) 2	53.948
	CNS0095615	Golden flower (tetraploid) 3	48.985
CRA001975	CRR073297	Stem 1	0.014
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.020
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.007
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.036
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.041
	CRR073306	Third green 1	0.003
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.025
	CRR073310	Second white 2	0.220
	CRR073311	Second white 3	0.214
	CRR073312	Silver flowering 1	1.298
	CRR073313	Silver flowering 2	1.308
	CRR073314	Silver flowering 3	0.774
	CRR073315	Gold flowering 1	0.164
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.113
	CRR073318	Tawny withering 1	0.082
	CRR073319	Tawny withering 2	0.066
	CRR073320	Tawny withering 3	0.000