Gene detail

Detail information of GWHGAAZE011868

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU22225.1	1.67565E-60	hypothetical protein MIMGU_mgv1a017857mg, partial [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-46	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|M0RU06\|M0RU06_MUSAM	5E-65	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P20760_001}
TAIR10	AT3G51550.1	1E-43	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74393258	74395916	+
GWHAAZE00000003	mRNA	74393258	74395916	+
GWHAAZE00000003	exon	74393258	74394013	+
GWHAAZE00000003	exon	74394237	74394732	+
GWHAAZE00000003	exon	74395498	74395916	+
GWHAAZE00000003	CDS	74393258	74394013	+
GWHAAZE00000003	CDS	74394237	74394732	+
GWHAAZE00000003	CDS	74395498	74395916	+

Transcript Sequence
>GWHTAAZE011880 ATGGTTGTTACTCAAGTTTCGATTCTACTCGTGTTTGTCTCTATCTTCTTCCTCCATAATCTATCGTTCAGCTACGCAAATAAGCTCCCAACTCCATATTCCCCTGTCGAAAACAGTCCCGTCAAAAACAAGTACTTATTCCCCGAGCCATCGACTCCAAGGCCACGGAAATGGTTGACTTTTGGCCGGGGGAACACAATTGCAACTTGTTTGATACTCGTAATCACACTGTTAAATATTATTGTCTTTAAGTTGCGGGAAATTCAGGAAGCAAATCTTGATGAGGAAGTAAATTTACCGTCGTCTTTGCCGTCAGAACGATCAGGCCGTCGCTTTTCACTAGCTGAAATCTTACTGGCCACACATAACTTTAGCAACGAATTGGTCCTCGGGCAAGGCGGATTTGGAAAAGTCTACAAAGGGGTCATAGACAACGGTACTGTTACGGCTGCCATTAAGCGGTTGAATCAAATGTCCAAACAAGGAGCACGTGAATTTTGGAACGAAATTGAGATGCTGTCCAAGTTTCGACACAGTCATCTCGTCTCACTAATTGGGTACTGTAAGATTGGGAAAGAGATGATCATCGTGTATGAATACATGGTCAATGGAACCTTAGCCGATCATTTGCACAAAAAAGTTACAAACGGTAGCAGCGGTACTTCGACTCTGTCTTGGGTTCAACGGCTCAAAATTTGCATCGGGGCTGCACGTGGATTGGATTATCTTCATACTGGCACTGGTGTTGTAGAAAGAGTGTTGTGCGGGAGACCGGTCATTGATTCTAGACTTGATCATGAGCAACGGGGACTTGCTGGATGGGCTCATCAAAACATGAAGGAAGGGACACTACATCAAATTATTGACCCACACTTGACAGGGCAAATCTTGCCCGATTCGTTGAAAACGTTTGCACAAATAGCGGATCAATGCCTGCATATGTTTTGGAAAAACCGTCCCACAATGGCCGAGGTTGTAGTCTCACTTGAGCTTGCTTTGGCATTGCAAGAGAGAGTAGATTCTTTTGTTTTTGAGGATTTTTTCACTGAAAACCAAGAGAATTCGATTTCTGTTTTGGAAAATGAAGGCACTGCCAATCTTCAAAACAATTTGCAACCGCAGGACCAAATGGATGAGATTACACAGCGAGGTGATGCAAGAAACGAACATCCTCGTGAAAAGCCCGTCAAGAAAACGGCATTGACTAGGATCGTACGGCAGGCTTTACTGGGAACAGCTCGGGTGATCTCAGGGAACAAACTGCCGAAGGTGAAAAGAACCTCCCGACACTCCGATGCCAATAACAAAGATGAAATGGCGACTGTAGGGAACAAACAATTTGATGCTAATATAGGCAGCAGTCTCAACAAAGAGGAAACAACGAGTACTTGGAGCAGAGAAGAGAAGGTGAAAAGAATTTTCCAACTTTTTGATGCCAATCGAGATGGCGGTCTTGGCCCAAGGGAAATGGCAGCACTTGTAGCCGCTACAAACCCTAGAATCAAAGTCAGTGATGATCAAATTGAAGCAATGATTGAGGAAGTCTATCGGAACTATGATGACTTTGTCGATGGTGAAAAGGGTCTCACATTTAGTGGGTTTTTGCGAAGCTACAATGACGGTGCTGGAGACCCTGATCGTGATTTCGCTATGCTCGGACTTGAACTTTAG

Network for GWHGAAZE011868

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	129	259	1.80E-23

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0005509	molecular_function	calcium ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.125
	SRR3591706	second leaf	0.765
	SRR3591707	mature leaf	0.696
	SRR3591708	Shoot apex	2.453
	SRR3591709	Stem	2.916
	SRR3591710	White floral bud	1.093
	SRR3591711	White flower	0.698
	SRR3591712	Green floral bud	0.695
	SRR3591713	Yellow flower	0.219
SRP173429	SRR8316895	Juvenile bud stage	0.625
	SRR8316896	Juvenile bud stage	0.714
	SRR8316897	Juvenile bud stage	0.939
	SRR8316894	Third green stage	0.303
	SRR8316900	Third green stage	0.672
	SRR8316901	Third green stage	0.562
	SRR8316898	Complete white stage	0.057
	SRR8316899	Complete white stage	1.321
	SRR8316903	Complete white stage	0.329
	SRR8316902	Silver flowering stage	0.039
	SRR8316904	Silver flowering stage	0.224
	SRR8316905	Silver flowering stage	0.055
	SRR8316906	Gold flowering stage	0.424
	SRR8316907	Gold flowering stage	0.276
	SRR8316908	Gold flowering stage	0.471
SRP132670	SRR6706286	Control	1.282
	SRR6706287	Light intensity 50%	1.028
	SRR6706288	Light intensity 20%	0.673
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.793
	CNS0095593	Slightly white alabastrum(diploid) 2	2.393
	CNS0095594	Slightly white alabastrum(diploid) 3	1.001
	CNS0095595	Whole white alabastrum(diploid) 2	1.016
	CNS0095596	Whole white alabastrum(diploid) 3	0.546
	CNS0095597	Whole white alabastrum(diploid) 4	1.144
	CNS0095598	Silvery flower (diploied) 1	2.026
	CNS0095599	Silvery flower (diploied) 2	1.972
	CNS0095600	Silvery flower (diploied) 3	0.488
	CNS0095601	Golden flower (diploid) 1	2.186
	CNS0095602	Golden flower (diploid) 2	1.539
	CNS0095603	Golden flower (diploid) 3	1.367
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.655
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.736
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.602
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.363
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.265
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.511
	CNS0095610	Silvery flower (tetraploid) 1	0.358
	CNS0095611	Silvery flower (tetraploid) 2	0.335
	CNS0095612	Silvery flower (tetraploid) 3	0.253
	CNS0095613	Golden flower (tetraploid) 1	0.183
	CNS0095614	Golden flower (tetraploid) 2	0.366
	CNS0095615	Golden flower (tetraploid) 3	0.031
CRA001975	CRR073297	Stem 1	0.420
	CRR073298	Stem 2	0.441
	CRR073299	Stem 3	0.214
	CRR073300	Leaf 1	0.665
	CRR073301	Leaf 2	0.787
	CRR073302	Leaf 3	0.301
	CRR073303	Juvenile bud 1	0.131
	CRR073304	Juvenile bud 2	0.380
	CRR073305	Juvenile bud 3	0.224
	CRR073306	Third green 1	0.013
	CRR073307	Third green 2	0.196
	CRR073308	Third green 3	0.115
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.041
	CRR073311	Second white 3	0.019
	CRR073312	Silver flowering 1	0.193
	CRR073313	Silver flowering 2	0.010
	CRR073314	Silver flowering 3	0.079
	CRR073315	Gold flowering 1	0.455
	CRR073316	Gold flowering 2	0.396
	CRR073317	Gold flowering 3	0.744
	CRR073318	Tawny withering 1	1.787
	CRR073319	Tawny withering 2	3.866
	CRR073320	Tawny withering 3	1.405